Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G074 Amborella trichopoda HOM05D005831 ORTHO05D007007 4.1e-212 741.1 370 100.0
MBI19_g11845_MAGBIO Magnolia biondii HOM05D005831 ORTHO05D007007 2.9e-133 479.2 341 71.3
PSO210G0521 Papaver somniferum HOM05D005831 ORTHO05D007007 2.4e-127 459.5 360 68.3
PSO210G7793 Papaver somniferum HOM05D005831 ORTHO05D007007 4.5e-126 455.3 360 67.8
Cfa018014 Carpinus fangiana HOM05D005831 ORTHO05D007007 5.5e-124 448.4 359 65.2
Thecc.09G062000 Theobroma cacao HOM05D005831 ORTHO05D007007 7.2e-124 448.0 340 67.6
RcHm_v2.0_Chr6g0311631 Rosa chinensis HOM05D005831 ORTHO05D007007 1.2e-123 447.2 339 67.3
GSVIVG01035453001 Vitis vinifera HOM05D005831 ORTHO05D007007 1.2e-123 447.2 362 66.0
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 2.7e-123 446.0 340 67.1
QL04p096581 Quercus lobata HOM05D005831 ORTHO05D007007 3.6e-123 445.7 341 66.9
Nn8g38706 Nelumbo nucifera HOM05D005831 ORTHO05D007007 6.1e-123 444.9 341 68.3
Gorai.001G020700 Gossypium raimondii HOM05D005831 ORTHO05D007007 7.9e-123 444.5 341 67.2
CiPaw.15G092600 Carya illinoinensis HOM05D005831 ORTHO05D007007 1.4e-122 443.7 371 63.9
Aqoxy3G01546 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 5.1e-122 441.8 342 65.2
FvH4_2g31140 Fragaria vesca HOM05D005831 ORTHO05D007007 2.6e-121 439.5 340 67.1
FAN24G1737 Fragaria x ananassa HOM05D005831 ORTHO05D007007 2.6e-121 439.5 340 67.1
Cpa.g.sc126.34 Carica papaya HOM05D005831 ORTHO05D007007 4.4e-121 438.7 341 66.0
ClCG05G015690 Citrullus lanatus HOM05D005831 ORTHO05D007007 1.3e-120 437.2 341 66.3
Duzib150G1275 Durio zibethinus HOM05D005831 ORTHO05D007007 3.7e-120 435.6 341 66.0
CSS0021293 Camellia sinensis var. sinensis HOM05D005831 ORTHO05D007007 4.8e-120 435.3 340 65.9
Gohir.D07G020000 Gossypium hirsutum HOM05D005831 ORTHO05D007007 2.4e-119 433.0 351 64.7
CANSAT25G0005 Cannabis sativa HOM05D005831 ORTHO05D007007 3.1e-119 432.6 341 64.8
Prupe.1G405700 Prunus persica HOM05D005831 ORTHO05D007007 3.1e-119 432.6 340 67.4
MD15G1051800 Malus domestica HOM05D005831 ORTHO05D007007 7.0e-119 431.4 340 67.4
Sed0012871 Sechium edule HOM05D005831 ORTHO05D007007 1.5e-118 430.3 343 64.4
MSTRG.25981 Avicennia marina HOM05D005831 ORTHO05D007007 2.6e-118 429.5 340 65.3
Eucgr.C03149 Eucalyptus grandis HOM05D005831 ORTHO05D007007 2.6e-118 429.5 340 64.4
PGR004G2090 Punica granatum HOM05D005831 ORTHO05D007007 2.6e-118 429.5 340 65.3
CsaV3_4G036010 Cucumis sativus L. HOM05D005831 ORTHO05D007007 7.7e-118 427.9 341 65.4
ECA234G1597 Erigeron canadensis HOM05D005831 ORTHO05D007007 7.7e-118 427.9 342 65.8
COL.COLO4_21126 Corchorus olitorius HOM05D005831 ORTHO05D007007 2.2e-117 426.4 333 66.4
Haze_18115 Corylus avellana HOM05D005831 ORTHO05D007007 3.8e-117 425.6 356 63.2
MD08G1070400 Malus domestica HOM05D005831 ORTHO05D007007 3.8e-117 425.6 340 66.2
Ciclev10025877m.g Citrus clementina HOM05D005831 ORTHO05D007007 1.5e-116 423.7 342 66.1
HanXRQChr12g0359011 Helianthus annuus HOM05D005831 ORTHO05D007007 1.9e-116 423.3 355 63.7
Medtr1g015390 Medicago truncatula HOM05D005831 ORTHO05D007007 1.9e-116 423.3 341 63.6
Actinidia25695 Actinidia chinensis HOM05D005831 ORTHO05D007007 3.2e-116 422.5 356 62.6
Phvul.001G039000 Phaseolus vulgaris HOM05D005831 ORTHO05D007007 1.2e-115 420.6 341 64.2
Manes.03G052700 Manihot esculenta HOM05D005831 ORTHO05D007007 1.6e-115 420.2 339 64.0
VMungo0647G0599 Vigna mungo HOM05D005831 ORTHO05D007007 1.6e-115 420.2 341 64.2
Migut.A00086 Erythranthe guttata HOM05D005831 ORTHO05D007007 1.8e-114 416.8 355 61.7
Glyma.14G099100 Glycine max HOM05D005831 ORTHO05D007007 1.8e-114 416.8 340 63.8
Potri.006G222000 Populus trichocarpa HOM05D005831 ORTHO05D007007 1.8e-114 416.8 341 65.7
Lsat_1_v5_gn_5_79500 Lactuca sativa HOM05D005831 ORTHO05D007007 2.3e-114 416.4 341 63.9
Lj5g0001901 Lotus japonicus HOM05D005831 ORTHO05D007007 3.0e-114 416.0 340 61.8
Solyc04g080930.4 Solanum lycopersicum HOM05D005831 ORTHO05D007007 3.0e-114 416.0 360 61.1
Sopen04g034540 Solanum pennellii HOM05D005831 ORTHO05D007007 3.0e-114 416.0 360 61.1
FAN15G1366 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.1e-113 414.1 332 66.0
Aa31LG5G18500 Aethionema arabicum HOM05D005831 ORTHO05D007007 2.6e-113 412.9 354 60.5
vmacro07801 Vaccinium macrocarpon HOM05D005831 ORTHO05D007007 2.6e-113 412.9 341 62.8
Carub.0004s0626 Capsella rubella HOM05D005831 ORTHO05D007007 3.3e-113 412.5 361 61.2
Sp4g07000 Schrenkiella parvula HOM05D005831 ORTHO05D007007 4.4e-113 412.1 362 60.5
BcaB08g35248 Brassica carinata HOM05D005831 ORTHO05D007007 5.7e-113 411.8 340 63.2
Lalb_Chr09g0334801 Lupinus albus HOM05D005831 ORTHO05D007007 5.7e-113 411.8 340 62.1
Os07g0608800 Oryza sativa ssp. japonica HOM05D005831 ORTHO05D007007 5.7e-113 411.8 343 62.4
PGSC0003DMG400003758 Solanum tuberosum HOM05D005831 ORTHO05D007007 5.7e-113 411.8 356 60.7
Glyma.17G225600 Glycine max HOM05D005831 ORTHO05D007007 9.7e-113 411.0 340 62.4
Thhalv10002014m.g Eutrema salsugineum HOM05D005831 ORTHO05D007007 1.3e-112 410.6 341 62.2
Nitab4.5_0000446g0240 Nicotiana tabacum HOM05D005831 ORTHO05D007007 1.7e-112 410.2 344 63.1
CAN.G6.15 Capsicum annuum HOM05D005831 ORTHO05D007007 2.8e-112 409.5 347 63.1
AL4G18970 Arabidopsis lyrata HOM05D005831 ORTHO05D007007 8.2e-112 407.9 372 59.7
Nitab4.5_0009773g0010 Nicotiana tabacum HOM05D005831 ORTHO05D007007 1.1e-111 407.5 347 62.8
TWI15G0825 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 1.1e-111 407.5 342 62.9
Cc08_g01270 Coffea canephora HOM05D005831 ORTHO05D007007 1.6e-110 403.7 374 58.8
Peaxi162Scf00101g01522 Petunia axillaris HOM05D005831 ORTHO05D007007 2.6e-110 402.9 359 59.9
A09p54720 Brassica napus HOM05D005831 ORTHO05D007007 5.9e-110 401.7 361 59.0
Oeu027284.3 Olea europaea HOM05D005831 ORTHO05D007007 1.0e-109 401.0 391 54.7
SalBow4G2055 Salvia bowleyana HOM05D005831 ORTHO05D001900 2.2e-109 399.8 337 62.0
BcaC07g40824 Brassica carinata HOM05D005831 ORTHO05D007007 3.8e-109 399.1 341 60.7
A09p55230 Brassica napus HOM05D005831 ORTHO05D007007 1.9e-108 396.7 361 59.0
BraA09t40881Z Brassica rapa HOM05D005831 ORTHO05D007007 7.2e-108 394.8 362 58.6
EL10Ac2g03793 Beta vulgaris HOM05D005831 ORTHO05D007007 2.1e-107 393.3 343 59.5
AUR62020581 Chenopodium quinoa HOM05D005831 ORTHO05D007007 8.0e-107 391.3 344 58.4
C08p38160 Brassica napus HOM05D005831 ORTHO05D007007 2.3e-106 389.8 341 61.6
BolC8t51391H Brassica oleracea HOM05D005831 ORTHO05D007007 2.3e-106 389.8 341 61.6
TAR383G0824 Trochodendron aralioides HOM05D005831 ORTHO05D007007 5.7e-105 385.2 307 67.1
unitig_748.g8240 Utricularia gibba HOM05D005831 ORTHO05D007007 3.7e-104 382.5 349 57.3
DCAR_003715 Daucus carota HOM05D005831 ORTHO05D007007 3.2e-100 369.4 305 64.6
CDE06G1722 Ceratophyllum demersum HOM05D005831 ORTHO05D007007 1.6e-99 367.1 300 66.0
AUR62009089 Chenopodium quinoa HOM05D005831 ORTHO05D007007 1.5e-97 360.5 344 55.8
Dinv41837 Davidia involucrata HOM05D005831 ORTHO05D007007 3.4e-97 359.4 306 62.1
AT2G26350 Arabidopsis thaliana HOM05D005831 ORTHO05D007007 3.7e-96 355.9 327 59.6
TWI38G0260 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 4.9e-96 355.5 353 56.4
Gohir.A07G020300 Gossypium hirsutum HOM05D005831 ORTHO05D007007 1.2e-94 350.9 289 63.3
THA.LOC104806019 Tarenaya hassleriana HOM05D005831 ORTHO05D007007 7.7e-94 348.2 373 52.3
Rhsim03G0040100 Rhododendron simsii HOM05D005831 ORTHO05D007007 1.3e-93 347.4 307 61.6
Sabra06G0171700 Salix brachista HOM05D005831 ORTHO05D007007 1.3e-93 347.4 361 56.0
BraA09t40930Z Brassica rapa HOM05D005831 ORTHO05D007007 1.9e-92 343.6 310 59.4
Sc09g0010090 Simmondsia chinensis HOM05D005831 ORTHO05D007007 7.2e-92 341.7 307 60.6
Lj2A627G34 Lonicera japonica HOM05D005831 ORTHO05D007007 2.8e-91 339.7 361 54.6
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea HOM05D005831 ORTHO05D007007 1.0e-90 337.8 340 54.4
Aqoxy2G00096 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 7.0e-87 325.1 344 52.3
Zm00001eb108960 Zea mays HOM05D005831 ORTHO05D007007 7.0e-87 325.1 294 58.2
Pp3c13_19650 Physcomitrium patens HOM05D005831 ORTHO05D007007 5.9e-86 322.0 354 50.3
Mapoly0029s0064 Marchantia polymorpha HOM05D005831 ORTHO05D007007 6.6e-85 318.5 360 49.2
Psat6g022600 Pisum sativum HOM05D005831 ORTHO05D007007 1.5e-84 317.4 289 57.4
Sed0000493 Sechium edule HOM05D005831 ORTHO05D007007 8.0e-83 311.6 288 57.6
Aqoxy3G01853 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 2.4e-79 300.1 342 48.5
Hma1.2p1_0231F.1_g097410 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 1.0e-77 294.7 269 58.7
FAN20G1335 Fragaria x ananassa HOM05D001583 ORTHO05D007007 8.6e-77 291.6 366 47.5
QL04p096516 Quercus lobata HOM05D000005 ORTHO05D000012 8.6e-77 291.6 265 58.9
FAN27G2028 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.1e-76 291.2 357 48.7
TPR.G10653 Trifolium pratense HOM05D005831 ORTHO05D007007 6.2e-75 285.4 230 62.2
SGA_v2.0_scaffold64G21865 Striga asiatica HOM05D005831 ORTHO05D007007 5.2e-74 282.3 353 47.0
Ca_13107_v3 Cicer arietinum L. HOM05D005831 ORTHO05D007007 7.5e-73 278.5 334 49.4
Migut.A00085 Erythranthe guttata HOM05D005831 ORTHO05D007007 8.3e-72 275.0 281 54.8
Atru.chr7.1858 Acer truncatum HOM05D005831 ORTHO05D007007 1.4e-58 231.1 200 61.0
TPR.G38878 Trifolium pratense HOM05D005831 ORTHO05D007007 2.4e-58 230.3 235 53.2
MELO3C016909.2 Cucumis melo HOM05D005831 ORTHO05D007007 1.5e-57 227.6 201 59.2
HPP92_027843 Vanilla planifolia HOM05D005831 ORTHO05D007007 2.1e-54 217.2 196 58.2
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea HOM05D005831 ORTHO05D007007 3.9e-45 186.4 331 38.4
arahy.Tifrunner.gnm1.ann1.VR587A Arachis hypogaea HOM05D005831 ORTHO05D007007 9.6e-44 181.8 367 37.9
AagrBONN_evm.TU.Sc2ySwM_117.3066 Anthoceros agrestis HOM05D005831 ORTHO05D007007 1.3e-43 181.4 175 53.1
SHI18844 Sapria himalayana HOM05D005831 ORTHO05D007007 1.8e-42 177.6 224 47.3
Actinidia27570 Actinidia chinensis HOM05D005831 ORTHO05D007007 2.0e-41 174.1 254 42.5
PRCOL_00001676 Prasinoderma coloniale HOM05D005831 ORTHO05D007007 2.2e-40 170.6 338 34.0
TPR.G40658 Trifolium pratense HOM05D005831 ORTHO05D007007 8.7e-37 158.7 143 53.8
CBR_g34477 Chara braunii HOM05D005831 ORTHO05D007007 1.1e-34 151.8 343 32.1
SEGI_09079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.0e-34 149.8 156 50.0
Aqoxy5G02406 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 6.5e-32 142.5 237 38.4
MCO12G124 Micromonas commoda HOM05D005831 ORTHO05D007007 1.4e-31 141.4 381 32.5
HPP92_027844 Vanilla planifolia HOM05D005831 ORTHO05D007007 6.0e-30 136.0 112 60.7
CARHR118440 Cardamine hirsuta HOM05D005831 ORTHO05D007007 1.9e-28 131.0 112 59.8
Cfa027250 Carpinus fangiana HOM05D005831 ORTHO05D007007 2.2e-24 117.5 373 26.8
Psat0s2173g0120 Pisum sativum HOM05D012210 ORTHO05D007007 2.8e-19 100.5 71 74.6
Cre07.g337050 Chlamydomonas reinhardtii HOM05D005831 ORTHO05D007007 3.4e-17 93.6 107 43.9
QL04p096475 Quercus lobata HOM05D000101 ORTHO05D000089 5.5e-15 86.3 67 56.7
SEGI_09068 Sequoiadendron giganteum HOM05D005831 ORTHO05D007007 7.2e-15 85.9 81 51.9
RcHm_v2.0_Chr4g0387071 Rosa chinensis HOM05D005831 ORTHO05D007007 2.5e-12 77.4 105 43.8
TWI38G1843 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 1.4e-10 71.6 67 52.2
arahy.Tifrunner.gnm1.ann1.FV9EQX Arachis hypogaea HOM05D005831 ORTHO05D007007 1.8e-10 71.2 36 86.1
QL06p019149 Quercus lobata HOM05D005831 ORTHO05D007007 2.4e-10 70.9 104 45.2
Solyc08g061880.2 Solanum lycopersicum HOM05D005831 ORTHO05D007007 1.2e-09 68.6 50 70.0
MELO3C032333.2 Cucumis melo HOM05D005831 ORTHO05D007007 2.2e-08 64.3 105 37.1


User provided reference genes

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