Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G063 Amborella trichopoda HOM05D004722 ORTHO05D005453 1.7e-36 155.6 83 100.0
PSO339G1234 Papaver somniferum HOM05D004722 ORTHO05D005453 3.8e-09 64.7 70 58.6
CSS0018564 Camellia sinensis var. sinensis HOM05D004722 ORTHO05D005453 6.5e-09 63.9 73 56.2
CSS0019299 Camellia sinensis var. sinensis HOM05D004722 ORTHO05D005453 6.5e-09 63.9 81 54.3
TAR636G1609 Trochodendron aralioides HOM05D004722 ORTHO05D005453 6.5e-09 63.9 65 64.6
CSS0017159 Camellia sinensis var. sinensis HOM05D004722 ORTHO05D005453 8.5e-09 63.5 73 56.2
Nn2g15722 Nelumbo nucifera HOM05D004722 ORTHO05D005453 1.9e-08 62.4 75 50.7
TAR633G0462 Trochodendron aralioides HOM05D004722 ORTHO05D005453 1.9e-08 62.4 65 61.5
TAR636G0988 Trochodendron aralioides HOM05D004722 ORTHO05D005453 1.9e-08 62.4 65 63.1
Nitab4.5_0000468g0090 Nicotiana tabacum HOM05D004722 ORTHO05D005453 7.2e-08 60.5 70 55.7
Rhsim13G0228000 Rhododendron simsii HOM05D004722 ORTHO05D005453 1.2e-07 59.7 70 54.3
RhsimUnG0154700 Rhododendron simsii HOM05D004722 ORTHO05D005453 1.2e-07 59.7 70 54.3
Lj3g0007026 Lotus japonicus HOM05D004722 ORTHO05D005453 4.7e-07 57.8 71 47.9
Phvul.005G042200 Phaseolus vulgaris HOM05D004722 ORTHO05D005453 4.7e-07 57.8 72 48.6
TPR.G16145 Trifolium pratense HOM05D004722 ORTHO05D005453 4.7e-07 57.8 69 52.2
Cpa.g.sc189.2 Carica papaya HOM05D004722 ORTHO05D005453 6.1e-07 57.4 67 52.2
Gorai.013G005600 Gossypium raimondii HOM05D004722 ORTHO05D005453 6.1e-07 57.4 69 56.5
Actinidia05843 Actinidia chinensis HOM05D004722 ORTHO05D005453 8.0e-07 57.0 70 54.3
ECA236G3701 Erigeron canadensis HOM05D004722 ORTHO05D005453 8.0e-07 57.0 88 47.7
Eucgr.B03635 Eucalyptus grandis HOM05D004722 ORTHO05D005453 8.0e-07 57.0 70 54.3
Gohir.A13G005400 Gossypium hirsutum HOM05D004722 ORTHO05D005453 8.0e-07 57.0 67 55.2
MD00G1055400 Malus domestica HOM05D004722 ORTHO05D005453 8.0e-07 57.0 71 52.1
Psat1g129080 Pisum sativum HOM05D004722 ORTHO05D005453 8.0e-07 57.0 69 52.2
Sabra09G0015700 Salix brachista HOM05D004722 ORTHO05D005453 8.0e-07 57.0 73 49.3
Solyc01g073720.2 Solanum lycopersicum HOM05D004722 ORTHO05D005453 8.0e-07 57.0 61 60.7
PGSC0003DMG400028984 Solanum tuberosum HOM05D004722 ORTHO05D005453 8.0e-07 57.0 72 55.6
MBI19_g17417_MAGBIO Magnolia biondii HOM05D004722 ORTHO05D005453 1.0e-06 56.6 67 50.7
Sopen01g033290 Solanum pennellii HOM05D004722 ORTHO05D005453 1.0e-06 56.6 61 60.7
PGSC0003DMG400028988 Solanum tuberosum HOM05D004722 ORTHO05D005453 1.0e-06 56.6 64 59.4
Aqoxy2G00098 Aquilegia oxysepala HOM05D004722 ORTHO05D005453 1.4e-06 56.2 76 46.1
Aqoxy3G01856 Aquilegia oxysepala HOM05D004722 ORTHO05D005453 1.4e-06 56.2 76 46.1
Hma1.2p1_1373F.1_g278710 Hydrangea macrophylla HOM05D004722 ORTHO05D005453 1.4e-06 56.2 62 62.9
Hma1.2p1_2663F.1_g326415 Hydrangea macrophylla HOM05D004722 ORTHO05D005453 1.4e-06 56.2 62 62.9
Nn7g35982 Nelumbo nucifera HOM05D004722 ORTHO05D005453 1.4e-06 56.2 75 49.3
CAN.G129.50 Capsicum annuum HOM05D004722 ORTHO05D005453 1.8e-06 55.8 70 51.4
CiPaw.13G035000 Carya illinoinensis HOM05D004722 ORTHO05D005453 1.8e-06 55.8 78 47.4
Sabra16G0138300 Salix brachista HOM05D004722 ORTHO05D005453 1.8e-06 55.8 74 50.0
Sed0000285 Sechium edule HOM05D004722 ORTHO05D005453 1.8e-06 55.8 70 54.3
Glyma.15G268200 Glycine max HOM05D004722 ORTHO05D005453 2.3e-06 55.5 69 49.3
MBI19_g17416_MAGBIO Magnolia biondii HOM05D004722 ORTHO05D005453 2.3e-06 55.5 67 50.7
MD02G1319500 Malus domestica HOM05D004722 ORTHO05D005453 2.3e-06 55.5 64 56.2
ClCG10G012700 Citrullus lanatus HOM05D004722 ORTHO05D005453 3.0e-06 55.1 70 52.9
Cc02_g26900 Coffea canephora HOM05D004722 ORTHO05D005453 3.0e-06 55.1 68 51.5
Glyma.08G158100 Glycine max HOM05D004722 ORTHO05D005453 3.0e-06 55.1 72 48.6
RcHm_v2.0_Chr1g0313231 Rosa chinensis HOM05D004722 ORTHO05D005453 3.0e-06 55.1 67 53.7
Sopen01g033320 Solanum pennellii HOM05D004722 ORTHO05D005453 3.0e-06 55.1 64 56.2
Atru.chr11.2706 Acer truncatum HOM05D004722 ORTHO05D005453 4.0e-06 54.7 69 53.6
Ca_03203_v3 Cicer arietinum L. HOM05D004722 ORTHO05D005453 4.0e-06 54.7 65 53.8
FAN01G1424 Fragaria x ananassa HOM05D000082 ORTHO05D005453 4.0e-06 54.7 66 54.5
Potri.001G010600 Populus trichocarpa HOM05D004722 ORTHO05D005453 4.0e-06 54.7 74 48.6
Potri.001G230900 Populus trichocarpa HOM05D004722 ORTHO05D005453 4.0e-06 54.7 74 47.3
Thecc.09G215900 Theobroma cacao HOM05D004722 ORTHO05D005453 4.0e-06 54.7 62 58.1
arahy.Tifrunner.gnm1.ann1.3B9L35 Arachis hypogaea HOM05D004722 ORTHO05D005453 5.2e-06 54.3 69 47.8
MELO3C023928.2 Cucumis melo HOM05D004722 ORTHO05D005453 5.2e-06 54.3 67 55.2
Peaxi162Scf00402g00810 Petunia axillaris HOM05D004722 ORTHO05D005453 5.2e-06 54.3 65 56.9
Potri.009G024300 Populus trichocarpa HOM05D004722 ORTHO05D005453 5.2e-06 54.3 73 47.9
COL.COLO4_10444 Corchorus olitorius HOM05D004722 ORTHO05D005453 6.8e-06 53.9 68 52.9
Eucgr.B02611 Eucalyptus grandis HOM05D004722 ORTHO05D005453 6.8e-06 53.9 75 50.7
Medtr2g061780 Medicago truncatula HOM05D004722 ORTHO05D005453 6.8e-06 53.9 69 49.3
Peaxi162Scf00245g00096 Petunia axillaris HOM05D004722 ORTHO05D005453 6.8e-06 53.9 71 46.5
GSVIVG01025254001 Vitis vinifera HOM05D004722 ORTHO05D005453 6.8e-06 53.9 61 55.7
Gohir.D13G005100 Gossypium hirsutum HOM05D004722 ORTHO05D005453 8.8e-06 53.5 63 55.6
Lalb_Chr25g0283671 Lupinus albus HOM05D004722 ORTHO05D005453 8.8e-06 53.5 69 47.8


User provided reference genes

Program Settings