Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G047 Amborella trichopoda HOM05D008087 ORTHO05D010187 7.7e-56 220.3 117 100.0
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 4.6e-24 114.8 116 51.7
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.1e-21 105.9 116 48.3
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.1e-21 105.9 116 48.3
Manes.16G095600 Manihot esculenta HOM05D008087 ORTHO05D010187 2.1e-21 105.9 117 41.9
Nn8g38653 Nelumbo nucifera HOM05D008087 ORTHO05D010187 1.1e-20 103.6 116 46.6
MBI19_g11825_MAGBIO Magnolia biondii HOM05D008087 ORTHO05D010187 2.3e-20 102.4 117 44.4
Ciclev10009482m.g Citrus clementina HOM05D008087 ORTHO05D010187 4.0e-20 101.7 116 43.1
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 8.9e-20 100.5 114 43.0
Lj4g0020355 Lotus japonicus HOM05D008087 ORTHO05D010187 1.2e-19 100.1 114 43.0
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 1.5e-19 99.8 114 41.2
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 2.6e-19 99.0 116 42.2
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.6e-19 99.0 114 46.5
Oeu049121.1 Olea europaea HOM05D008087 ORTHO05D010187 2.6e-19 99.0 116 41.4
RcHm_v2.0_Chr2g0094891 Rosa chinensis HOM05D008087 ORTHO05D010187 2.6e-19 99.0 116 41.4
Thecc.09G077500 Theobroma cacao HOM05D008087 ORTHO05D010187 2.6e-19 99.0 116 40.5
Peaxi162Scf00127g00202 Petunia axillaris HOM05D008087 ORTHO05D010187 4.4e-19 98.2 106 44.3
Nitab4.5_0000343g0200 Nicotiana tabacum HOM05D008087 ORTHO05D010187 5.8e-19 97.8 106 44.3
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 5.8e-19 97.8 116 39.7
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 7.5e-19 97.4 117 41.9
Duzib168G2281 Durio zibethinus HOM05D008087 ORTHO05D010187 1.3e-18 96.7 116 42.2
Gohir.A06G076300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 1.3e-18 96.7 116 39.7
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 2.2e-18 95.9 117 45.3
Medtr4g125370 Medicago truncatula HOM05D008087 ORTHO05D010187 2.2e-18 95.9 114 39.5
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 2.9e-18 95.5 116 37.9
Cfa002992 Carpinus fangiana HOM05D008087 ORTHO05D010187 2.9e-18 95.5 116 43.1
Gorai.010G088200 Gossypium raimondii HOM05D008087 ORTHO05D010187 2.9e-18 95.5 116 38.8
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 3.7e-18 95.1 116 38.8
Gohir.D06G075300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 3.7e-18 95.1 116 38.8
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 6.4e-18 94.4 117 41.0
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 6.4e-18 94.4 107 43.9
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 8.3e-18 94.0 114 41.2
Lalb_Chr07g0181171 Lupinus albus HOM05D008087 ORTHO05D010187 8.3e-18 94.0 114 41.2
Potri.018G065700 Populus trichocarpa HOM05D008087 ORTHO05D010187 1.4e-17 93.2 118 40.7
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 1.9e-17 92.8 116 39.7
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 2.4e-17 92.4 114 40.4
CANSAT56G3514 Cannabis sativa HOM05D008087 ORTHO05D010187 3.2e-17 92.0 113 40.7
Sabra18G0058300 Salix brachista HOM05D008087 ORTHO05D010187 4.1e-17 91.7 118 39.8
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 4.1e-17 91.7 116 39.7
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 5.4e-17 91.3 114 40.4
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 7.0e-17 90.9 114 40.4
Rhsim05G0007800 Rhododendron simsii HOM05D008087 ORTHO05D010187 7.0e-17 90.9 116 39.7
COL.COLO4_18101 Corchorus olitorius HOM05D008087 ORTHO05D010187 1.2e-16 90.1 116 38.8
PSO135G0253 Papaver somniferum HOM05D008087 ORTHO05D010187 1.2e-16 90.1 116 38.8
Eucgr.C03187 Eucalyptus grandis HOM05D008087 ORTHO05D010187 2.7e-16 89.0 116 38.8
Eucgr.L02787 Eucalyptus grandis HOM05D008087 ORTHO05D010187 2.7e-16 89.0 116 38.8
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 3.5e-16 88.6 117 41.0
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 4.6e-16 88.2 110 40.0
arahy.Tifrunner.gnm1.ann1.TB6UZQ Arachis hypogaea HOM05D008087 ORTHO05D010187 7.8e-16 87.4 114 40.4
Cpa.g.sc28.44 Carica papaya HOM05D008087 ORTHO05D010187 7.8e-16 87.4 118 38.1
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 7.8e-16 87.4 116 40.5
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 7.8e-16 87.4 116 38.8
AUR62028937 Chenopodium quinoa HOM05D008087 ORTHO05D010187 1.0e-15 87.0 118 39.8
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 1.7e-15 86.3 116 37.9
Ca_21320_v3 Cicer arietinum L. HOM05D008087 ORTHO05D010187 3.0e-15 85.5 114 36.0
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 3.0e-15 85.5 116 34.5
Duzib187G0811 Durio zibethinus HOM05D008087 ORTHO05D010187 5.1e-15 84.7 105 38.1
TPR.G12579 Trifolium pratense HOM05D008087 ORTHO05D010187 6.6e-15 84.3 114 34.2
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 8.6e-15 84.0 112 36.6
PSO724G0984 Papaver somniferum HOM05D008087 ORTHO05D010187 8.1e-13 77.4 106 39.6
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 2.6e-11 72.4 106 36.8
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 1.7e-10 69.7 103 38.8
Ah.14g084950 Amaranthus hybridus HOM05D008087 ORTHO05D010187 4.9e-10 68.2 112 41.1
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 8.3e-10 67.4 117 38.5
Sc08g0008880 Simmondsia chinensis HOM05D008087 ORTHO05D010187 7.8e-08 60.8 116 35.3
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 3.0e-07 58.9 92 37.0
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 6.6e-07 57.8 116 33.6
AT3G42725 Arabidopsis thaliana HOM05D008087 ORTHO05D010187 1.5e-06 56.6 117 33.3
MD15G1091800 Malus domestica HOM05D008087 ORTHO05D010187 1.9e-06 56.2 85 32.9


User provided reference genes

Program Settings