Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.4e-141 505.0 251 100.0
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 2.0e-93 346.3 208 83.2
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 9.9e-93 344.0 206 80.1
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 9.9e-93 344.0 209 81.8
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 2.1e-90 336.3 212 77.8
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 3.5e-90 335.5 211 76.8
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 4.6e-90 335.1 209 79.9
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 4.6e-90 335.1 208 78.4
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 4.6e-90 335.1 210 78.1
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 7.9e-90 334.3 219 75.8
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 1.0e-89 334.0 208 78.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.7e-89 333.2 208 78.4
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 2.3e-89 332.8 208 78.4
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 2.3e-89 332.8 208 77.9
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 3.0e-89 332.4 206 78.6
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 3.9e-89 332.0 208 78.4
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 6.6e-89 331.3 208 77.4
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 8.7e-89 330.9 208 76.9
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 1.9e-88 329.7 207 77.8
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.9e-88 329.7 208 77.4
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.9e-88 329.7 208 76.9
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.9e-88 329.7 208 77.4
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.5e-88 329.3 208 77.9
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 4.3e-88 328.6 212 76.4
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 4.3e-88 328.6 208 76.9
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 1.6e-87 326.6 208 76.0
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 2.8e-87 325.9 207 77.3
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 3.6e-87 325.5 205 76.6
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 4.8e-87 325.1 209 75.6
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.4e-86 322.8 208 73.1
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 3.1e-86 322.4 208 75.5
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 4.0e-86 322.0 205 76.1
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 4.0e-86 322.0 206 77.7
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 5.3e-86 321.6 218 74.3
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 5.3e-86 321.6 208 76.4
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 9.0e-86 320.9 209 75.1
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 1.2e-85 320.5 206 75.2
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 1.2e-85 320.5 206 75.2
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 1.2e-85 320.5 208 75.0
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.2e-85 320.5 208 72.6
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.2e-85 320.5 209 75.1
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.2e-85 320.5 209 75.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 2.0e-85 319.7 200 80.0
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 3.4e-85 318.9 206 74.8
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 3.4e-85 318.9 206 74.8
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 5.8e-85 318.2 204 76.0
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 7.6e-85 317.8 214 74.8
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 7.6e-85 317.8 206 74.8
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 9.9e-85 317.4 208 74.0
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.3e-84 317.0 208 74.0
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.3e-84 317.0 208 72.6
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.3e-84 317.0 208 72.6
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.3e-84 317.0 208 72.6
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 1.3e-84 317.0 208 71.6
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.7e-84 316.6 209 76.1
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 1.7e-84 316.6 206 74.8
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.9e-84 315.8 206 74.8
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.9e-84 315.8 206 74.8
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.9e-84 315.8 206 74.8
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 2.9e-84 315.8 206 74.8
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.9e-84 315.8 206 74.8
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 4.9e-84 315.1 208 72.1
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 8.4e-84 314.3 206 74.3
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.1e-83 313.9 208 73.6
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-83 313.9 208 72.1
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 7.1e-83 311.2 221 70.1
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 4.8e-79 298.5 200 71.0
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.1e-78 297.4 207 69.1
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 3.1e-78 295.8 209 67.5
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.6e-77 292.7 208 70.2
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 3.4e-77 292.4 276 58.0
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 5.8e-77 291.6 196 71.9
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 5.8e-77 291.6 208 70.2
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 8.4e-76 287.7 233 65.2
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.1e-74 283.1 198 67.7
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 2.1e-74 283.1 253 59.3
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.0e-73 280.8 225 66.2
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 6.7e-73 278.1 206 68.0
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 3.3e-72 275.8 267 58.1
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 5.7e-72 275.0 203 70.4
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 1.3e-71 273.9 206 68.4
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 3.7e-71 272.3 209 68.4
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.8e-70 270.0 250 59.6
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.8e-70 270.0 190 72.6
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.5e-69 266.9 155 82.6
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.0e-69 266.5 196 63.3
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.0e-68 264.2 196 62.8
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 5.5e-67 258.5 158 77.8
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 6.1e-66 255.0 192 66.7
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.0e-65 252.7 154 79.2
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 8.7e-65 251.1 168 72.6
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 2.5e-64 249.6 206 63.6
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.0e-61 240.0 178 67.4
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 2.6e-61 239.6 156 74.4
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 2.9e-60 236.1 192 63.5
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 5.0e-60 235.3 204 60.8
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 8.5e-60 234.6 193 65.3
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.1e-58 228.4 148 70.9
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.3e-56 222.6 136 77.9
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 3.7e-55 219.2 207 56.0
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 6.9e-54 214.9 197 60.9
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 6.9e-54 214.9 141 68.8
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.9e-51 206.8 207 57.0
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 3.2e-51 206.1 142 71.8
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 5.7e-48 195.3 182 56.6
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 6.5e-44 181.8 208 50.0
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 8.0e-42 174.9 135 60.0
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.0e-41 174.5 206 50.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 2.7e-37 159.8 101 73.3
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 4.2e-35 152.5 120 62.5
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 2.8e-31 139.8 217 45.2
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.8e-30 137.1 80 73.8
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 4.4e-24 115.9 206 39.8
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.7e-20 104.0 207 34.3
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.5e-19 100.9 189 32.3
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 9.8e-16 88.2 56 75.0
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 1.4e-14 84.3 218 30.3
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.9e-11 73.9 44 79.5
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.9e-11 73.9 54 64.8
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.1e-10 70.5 46 71.7
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-09 68.2 54 64.8


User provided reference genes

Program Settings