Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0594G191 Amborella trichopoda HOM05D020218 ORTHO05D013427 1.1e-95 353.2 167 100.0
ATR0730G071 Amborella trichopoda HOM05D020218 ORTHO05D017274 2.2e-40 169.5 157 52.9
ATR1159G057 Amborella trichopoda HOM05D020218 ORTHO05D013427 2.2e-35 152.9 148 52.7
ATR0661G070 Amborella trichopoda HOM05D020218 ORTHO05D013427 4.5e-25 118.6 113 53.1
MBI18_g14086_MAGBIO Magnolia biondii HOM05D018115 ORTHO05D017274 1.2e-14 84.0 130 35.4
ATR0996G008 Amborella trichopoda HOM05D020218 ORTHO05D013427 1.1e-10 70.9 47 76.6
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 3.1e-10 69.3 111 35.1
Dinv32585 Davidia involucrata HOM05D013692 ORTHO05D011718 1.2e-09 67.4 120 30.0
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 2.7e-09 66.2 111 33.3
TAR365G1003 Trochodendron aralioides HOM05D000896 ORTHO05D000594 2.7e-09 66.2 135 34.8
Aqoxy5G01564 Aquilegia oxysepala HOM05D032674 ORTHO05D031249 3.5e-09 65.9 110 30.9
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 4.5e-09 65.5 116 33.6
MBI15_g10491_MAGBIO Magnolia biondii HOM05D012620 ORTHO05D013427 5.9e-09 65.1 113 38.1
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 1.0e-08 64.3 166 33.7
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 1.3e-08 63.9 118 34.7
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 1.7e-08 63.5 111 35.1
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 1.7e-08 63.5 120 30.8
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 2.9e-08 62.8 112 32.1
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 3.8e-08 62.4 109 32.1
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 3.8e-08 62.4 132 31.8
MBI15_g10492_MAGBIO Magnolia biondii HOM05D012620 ORTHO05D013427 6.5e-08 61.6 105 36.2
MBI15_g10496_MAGBIO Magnolia biondii HOM05D012620 ORTHO05D013427 6.5e-08 61.6 105 33.3
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.1e-07 60.8 117 31.6
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 1.1e-07 60.8 114 34.2
Sc07g0010080 Simmondsia chinensis HOM05D020218 ORTHO05D017274 1.1e-07 60.8 130 32.3
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 2.5e-07 59.7 111 30.6
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 2.5e-07 59.7 111 30.6
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 5.5e-07 58.5 114 33.3
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.5e-07 58.5 111 33.3
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 7.2e-07 58.2 111 32.4
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 7.2e-07 58.2 95 37.9
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 9.4e-07 57.8 117 33.3
MBI15_g33923_MAGBIO Magnolia biondii HOM05D012620 ORTHO05D013427 9.4e-07 57.8 123 34.1
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.2e-06 57.4 111 33.3
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 1.2e-06 57.4 111 33.3
Nn2g14476 Nelumbo nucifera HOM05D018115 ORTHO05D017274 3.6e-06 55.8 130 33.1
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 4.7e-06 55.5 119 31.9
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 4.7e-06 55.5 110 29.1


User provided reference genes

Program Settings