Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0594G188 Amborella trichopoda HOM05D000176 ORTHO05D011301 8.3e-72 273.5 126 100.0
ATR0147G006 Amborella trichopoda HOM05D000176 ORTHO05D011301 6.8e-42 174.1 99 77.8
ATR0149G004 Amborella trichopoda HOM05D000176 ORTHO05D011301 3.2e-39 165.2 107 70.1
ATR0736G186 Amborella trichopoda HOM05D000176 ORTHO05D011301 3.9e-37 158.3 99 70.7
ATR0953G003 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.8e-34 149.4 96 69.8
ATR0827G097 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.1e-28 130.2 108 54.6
ATR0329G034 Amborella trichopoda HOM05D000176 ORTHO05D011301 3.6e-27 125.2 70 77.1
ATR0317G066 Amborella trichopoda HOM05D000176 ORTHO05D011301 3.2e-23 112.1 91 57.1
ATR0314G026 Amborella trichopoda HOM05D000176 ORTHO05D011301 5.4e-23 111.3 93 60.2
ATR0051G037 Amborella trichopoda HOM05D000176 ORTHO05D011301 7.1e-23 110.9 72 68.1
ATR1128G038 Amborella trichopoda HOM05D000176 ORTHO05D011301 6.0e-22 107.8 71 66.2
ATR1152G075 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.7e-21 106.3 97 56.7
ATR0712G175 Amborella trichopoda HOM05D000176 ORTHO05D011301 2.5e-20 102.4 71 63.4
ATR0745G095 Amborella trichopoda HOM05D000176 ORTHO05D011301 4.3e-20 101.7 99 54.5
ATR1134G086 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.3e-19 100.1 97 50.5
ATR0624G108 Amborella trichopoda HOM05D000176 ORTHO05D011301 2.4e-18 95.9 57 73.7
ATR0776G028 Amborella trichopoda HOM05D000176 ORTHO05D011301 4.0e-18 95.1 99 48.5
ATR0800G013 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.3e-16 90.1 52 75.0
ATR0580G348 Amborella trichopoda HOM05D000176 ORTHO05D011301 2.2e-16 89.4 51 72.5
ATR0026G046 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.1e-15 87.0 57 71.9
ATR1125G053 Amborella trichopoda HOM05D000176 ORTHO05D011301 3.5e-14 82.0 47 70.2
ATR0789G144 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.1e-12 77.0 97 43.3
ATR0745G057 Amborella trichopoda HOM05D000176 ORTHO05D011301 8.1e-11 70.9 81 45.7
ATR0627G003 Amborella trichopoda HOM05D000176 ORTHO05D011301 2.4e-10 69.3 99 39.4
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 3.4e-09 65.5 88 38.6
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-09 65.5 88 38.6
ATR0712G040 Amborella trichopoda HOM05D000176 ORTHO05D011301 4.5e-09 65.1 47 61.7
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-09 65.1 88 37.5
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-09 64.3 88 38.6
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 63.5 88 36.4
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-08 63.2 87 37.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-08 63.2 88 36.4
ATR0088G001 Amborella trichopoda HOM05D000176 ORTHO05D011301 3.8e-08 62.0 36 75.0
ATR0620G144 Amborella trichopoda HOM05D009392 ORTHO05D012298 8.4e-08 60.8 93 36.6
ATR0033G029 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.1e-07 60.5 38 63.2
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-07 60.5 112 33.9
ATR0030G016 Amborella trichopoda HOM05D009392 ORTHO05D011301 1.9e-07 59.7 72 40.3
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.3 88 37.5
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.3 88 37.5
ATR0332G114 Amborella trichopoda HOM05D000176 ORTHO05D011301 3.2e-07 58.9 48 60.4
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-07 58.9 83 34.9
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-07 58.2 84 36.9
Os07g0507600 Oryza sativa ssp. japonica HOM05D000176 ORTHO05D000106 5.5e-07 58.2 99 34.3
Prupe.4G252400 Prunus persica HOM05D000176 ORTHO05D000106 5.5e-07 58.2 74 36.5
Zm00001eb105710 Zea mays HOM05D000176 ORTHO05D000106 5.5e-07 58.2 99 34.3
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-07 57.8 88 36.4
RcHm_v2.0_Chr5g0052481 Rosa chinensis HOM05D000176 ORTHO05D000106 7.1e-07 57.8 74 39.2
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-07 57.4 75 38.7
ATR0605G002 Amborella trichopoda HOM05D000176 ORTHO05D000106 1.6e-06 56.6 65 47.7
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-06 56.6 88 37.5
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-06 56.2 114 30.7
arahy.Tifrunner.gnm1.ann1.6TXF5J Arachis hypogaea HOM05D000176 ORTHO05D000106 2.7e-06 55.8 116 29.3
ATR0686G053 Amborella trichopoda HOM05D009392 ORTHO05D012298 3.5e-06 55.5 74 41.9
FvH4_3g28611 Fragaria vesca HOM05D000176 ORTHO05D000106 3.5e-06 55.5 74 39.2
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-06 55.5 88 36.4
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-06 55.5 95 32.6
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-06 55.1 82 36.6
arahy.Tifrunner.gnm1.ann1.PINR01 Arachis hypogaea HOM05D000176 ORTHO05D000106 6.0e-06 54.7 113 29.2
FvH4_6g33711 Fragaria vesca HOM05D000176 ORTHO05D000106 6.0e-06 54.7 76 40.8
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-06 54.7 84 36.9
RcHm_v2.0_Chr2g0143601 Rosa chinensis HOM05D000176 ORTHO05D000106 6.0e-06 54.7 76 40.8
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.9e-06 54.3 75 38.7
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.9e-06 54.3 75 38.7
Ca_23329_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.9e-06 54.3 106 29.2
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-06 54.3 88 35.2


User provided reference genes

Program Settings