Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 1.9e-153 545.8 275 100.0
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 2.5e-57 226.5 278 50.4
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 5.6e-57 225.3 298 46.0
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 1.3e-56 224.2 303 44.9
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 2.4e-55 219.9 294 46.6
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 3.1e-55 219.5 299 46.2
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 9.0e-55 218.0 284 48.2
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 1.2e-54 217.6 277 49.1
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 2.0e-54 216.9 295 45.8
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 2.0e-54 216.9 305 45.9
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 9.9e-54 214.5 304 44.4
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 9.9e-54 214.5 301 45.2
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 4.9e-53 212.2 296 44.9
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 1.9e-52 210.3 313 43.5
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 2.4e-52 209.9 302 44.7
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 5.5e-52 208.8 298 43.6
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 7.1e-52 208.4 311 43.4
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 9.3e-52 208.0 310 45.5
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.2e-51 207.6 307 43.0
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 1.6e-51 207.2 327 41.9
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 2.1e-51 206.8 309 42.7
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 7.9e-51 204.9 327 40.7
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 1.3e-50 204.1 319 41.7
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 1.3e-50 204.1 302 45.4
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.3e-50 204.1 290 46.6
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 2.3e-50 203.4 302 42.7
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 3.0e-50 203.0 285 45.6
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 3.9e-50 202.6 304 43.1
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 5.1e-50 202.2 286 46.2
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 6.7e-50 201.8 293 45.7
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.1e-49 201.1 295 42.7
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.5e-49 200.7 303 42.9
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 2.5e-49 199.9 301 44.2
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.5e-49 199.9 296 43.2
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 2.5e-49 199.9 298 43.6
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 3.3e-49 199.5 289 43.6
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 4.3e-49 199.1 304 42.8
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 4.3e-49 199.1 303 44.2
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 9.6e-49 198.0 293 45.4
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 1.6e-48 197.2 296 43.9
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.6e-48 197.2 271 45.8
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 1.6e-48 197.2 315 41.6
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 4.8e-48 195.7 308 41.9
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 8.1e-48 194.9 302 42.7
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 8.1e-48 194.9 305 41.0
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 8.1e-48 194.9 305 43.0
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 1.4e-47 194.1 299 43.1
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 1.8e-47 193.7 298 43.6
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.4e-47 193.4 299 42.8
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 9.0e-47 191.4 306 41.5
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 9.0e-47 191.4 299 43.1
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 9.0e-47 191.4 297 43.1
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 1.2e-46 191.0 286 45.1
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 1.5e-46 190.7 294 43.2
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.0e-46 190.3 299 42.1
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 2.0e-46 190.3 303 42.6
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 2.0e-46 190.3 298 42.6
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 4.5e-46 189.1 306 41.2
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 7.6e-46 188.3 305 42.3
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 7.6e-46 188.3 292 42.1
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 7.6e-46 188.3 292 42.1
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 1.0e-45 188.0 302 42.7
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.0e-45 188.0 299 42.1
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.0e-45 188.0 301 42.2
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 1.3e-45 187.6 301 40.9
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 1.7e-45 187.2 283 44.2
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 2.9e-45 186.4 303 41.3
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 4.9e-45 185.7 284 41.2
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 6.5e-45 185.3 303 40.3
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.4e-44 184.1 300 42.0
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.4e-44 184.1 288 41.7
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 1.9e-44 183.7 292 40.4
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 2.5e-44 183.3 282 43.3
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 2.5e-44 183.3 288 43.1
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 3.2e-44 183.0 304 42.1
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.2e-44 183.0 301 41.9
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 4.2e-44 182.6 300 41.7
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 9.3e-44 181.4 301 41.9
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 1.2e-43 181.0 302 41.7
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 1.2e-43 181.0 296 42.2
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 2.7e-43 179.9 300 41.3
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 3.5e-43 179.5 305 37.7
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 1.8e-42 177.2 300 42.0
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.8e-42 177.2 314 38.9
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 3.0e-42 176.4 300 41.3
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 3.0e-42 176.4 312 39.7
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 1.1e-41 174.5 303 39.6
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 1.9e-41 173.7 302 40.4
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 2.5e-41 173.3 303 43.6
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 9.6e-41 171.4 302 39.4
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 6.3e-40 168.7 305 38.7
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 3.1e-39 166.4 309 39.5
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 1.5e-38 164.1 301 39.2
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.7e-37 160.6 306 37.9
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 1.7e-37 160.6 287 40.8
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 2.2e-37 160.2 378 33.9
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 2.9e-37 159.8 293 39.6
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 1.9e-36 157.1 303 37.0
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 8.7e-34 148.3 185 45.9
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 4.3e-33 146.0 286 38.1
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.3e-29 134.4 278 35.3
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.4e-28 131.0 237 40.9
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 1.9e-28 130.6 167 46.1
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 2.7e-27 126.7 155 49.0
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 6.1e-27 125.6 283 33.6
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 3.9e-26 122.9 336 30.1
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 5.1e-26 122.5 281 35.2
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 2.9e-21 106.7 191 34.6
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 3.8e-21 106.3 273 32.6
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 2.0e-17 94.0 381 24.1
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 2.2e-16 90.5 256 28.5
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 7.0e-15 85.5 120 45.0
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 7.7e-14 82.0 132 40.2
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 1.5e-09 67.8 77 49.4
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 2.2e-08 63.9 132 37.1
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 4.1e-07 59.7 236 30.1
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 9.1e-07 58.5 53 54.7


User provided reference genes

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