Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.0e-131 473.4 232 100.0
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 1.1e-69 267.3 234 53.0
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.5e-66 256.1 233 50.6
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 6.8e-64 248.1 220 50.9
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 8.9e-64 247.7 324 41.7
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.7e-62 243.4 180 60.0
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 3.2e-61 239.2 180 54.4
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 4.1e-61 238.8 230 47.0
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 7.1e-61 238.0 210 51.4
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 7.1e-61 238.0 227 48.9
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 1.6e-60 236.9 233 49.4
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 7.8e-60 234.6 177 55.9
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 7.8e-60 234.6 177 55.9
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 3.9e-59 232.3 230 47.8
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 3.9e-59 232.3 235 46.8
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 3.3e-58 229.2 180 53.3
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 2.8e-57 226.1 234 44.9
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 2.8e-57 226.1 233 47.2
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 6.2e-57 224.9 178 55.1
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 1.8e-56 223.4 183 53.6
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 6.9e-56 221.5 178 52.8
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 1.5e-55 220.3 237 45.6
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 2.6e-55 219.5 177 53.1
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 9.9e-55 217.6 185 52.4
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.9e-53 213.4 178 53.4
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 3.2e-53 212.6 177 54.8
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 9.3e-53 211.1 226 47.8
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 9.3e-53 211.1 164 55.5
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 4.6e-52 208.8 177 49.7
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 6.0e-52 208.4 179 52.5
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 7.8e-52 208.0 215 47.0
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.0e-51 207.6 182 53.3
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.0e-51 207.6 180 52.2
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 1.7e-51 206.8 181 48.6
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 2.3e-51 206.5 182 52.2
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 3.9e-51 205.7 182 51.1
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 5.1e-51 205.3 215 46.5
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 5.1e-51 205.3 184 51.1
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 8.7e-51 204.5 182 50.5
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.5e-50 203.8 182 52.7
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.5e-50 203.8 230 44.8
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.5e-50 203.0 199 48.7
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 2.5e-50 203.0 199 48.7
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 7.3e-50 201.4 199 47.7
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 9.6e-50 201.1 233 42.5
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.6e-49 200.3 179 49.7
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 2.8e-49 199.5 201 49.8
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 4.8e-49 198.7 181 48.6
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 6.2e-49 198.4 177 51.4
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 8.1e-49 198.0 226 44.7
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.1e-48 197.6 181 49.7
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 3.1e-48 196.1 226 43.8
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 4.0e-48 195.7 233 42.5
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 9.9e-47 191.0 173 52.6
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 2.2e-46 189.9 178 49.4
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 3.8e-46 189.1 242 41.3
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.9e-45 186.8 182 48.4
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 2.4e-45 186.4 235 37.9
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.4e-45 186.4 242 41.3
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.2e-45 186.0 242 40.9
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 3.2e-45 186.0 207 43.0
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 7.1e-45 184.9 233 40.8
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 9.3e-45 184.5 239 40.2
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.2e-44 184.1 237 38.8
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.6e-44 183.7 237 38.8
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 1.6e-44 183.7 168 47.6
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.1e-44 183.3 237 39.7
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.1e-44 183.3 167 49.1
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 2.1e-44 183.3 194 46.4
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.5e-44 182.6 230 41.7
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 3.5e-44 182.6 232 41.4
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 4.6e-44 182.2 181 47.0
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 4.6e-44 182.2 183 45.9
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 7.9e-44 181.4 238 39.1
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.0e-43 181.0 236 38.1
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 1.3e-43 180.6 189 44.4
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 2.3e-43 179.9 218 40.8
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 2.3e-43 179.9 232 40.1
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 8.7e-43 177.9 180 43.9
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 1.5e-42 177.2 178 45.5
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 9.6e-42 174.5 181 44.8
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 9.6e-42 174.5 223 40.8
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 2.8e-41 172.9 173 46.2
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 3.7e-41 172.6 174 42.5
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 1.1e-40 171.0 181 44.2
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 6.9e-40 168.3 167 45.5
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 4.5e-39 165.6 170 42.9
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 4.9e-38 162.2 231 37.2
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 1.9e-37 160.2 208 40.9
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 6.7e-35 151.8 200 40.0
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.2e-31 141.0 122 50.8
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 2.0e-31 140.2 113 54.0
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 3.4e-31 139.4 139 46.0
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 3.9e-27 125.9 224 35.3
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 4.1e-24 115.9 83 53.0
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 3.8e-22 109.4 78 60.3
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 6.5e-22 108.6 101 50.5
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.9e-21 107.1 140 35.7
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.4e-19 100.9 86 50.0
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 5.1e-19 99.0 61 67.2
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.5e-18 97.4 70 55.7
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 2.8e-17 93.2 192 30.7
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 3.7e-17 92.8 190 30.5
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 8.2e-17 91.7 78 56.4
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 1.8e-16 90.5 196 29.1
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 3.4e-15 86.3 172 33.7
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 3.3e-10 69.7 184 27.7
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.8e-09 66.6 70 42.9


User provided reference genes

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