Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0589G004 Amborella trichopoda HOM05D001602 ORTHO05D001470 8.2e-51 203.4 99 100.0
ATR0105G012 Amborella trichopoda HOM05D001602 ORTHO05D001470 3.6e-46 188.0 98 92.9
TAR636G1265 Trochodendron aralioides HOM05D001602 ORTHO05D001470 6.8e-13 77.4 112 46.4
Nn6g35272 Nelumbo nucifera HOM05D001602 ORTHO05D001470 1.3e-11 73.2 105 41.0
CSS0039176 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 1.7e-11 72.8 113 41.6
vmacro03265 Vaccinium macrocarpon HOM05D001602 ORTHO05D001470 4.9e-11 71.2 109 40.4
Actinidia24136 Actinidia chinensis HOM05D001602 ORTHO05D001470 4.1e-10 68.2 110 40.9
Cc01_g10470 Coffea canephora HOM05D001602 ORTHO05D001470 4.1e-10 68.2 108 38.9
GSVIVG01031494001 Vitis vinifera HOM05D001602 ORTHO05D001470 7.1e-10 67.4 113 40.7
GSVIVG01015742001 Vitis vinifera HOM05D001602 ORTHO05D001470 1.2e-09 66.6 111 40.5
PSO339G6573 Papaver somniferum HOM05D001602 ORTHO05D001470 2.1e-09 65.9 110 43.6
Potri.009G006800 Populus trichocarpa HOM05D001602 ORTHO05D001470 2.1e-09 65.9 110 38.2
DCAR_006111 Daucus carota HOM05D001602 ORTHO05D001470 2.7e-09 65.5 108 41.7
Lj1A210T38 Lonicera japonica HOM05D001602 ORTHO05D001470 3.5e-09 65.1 112 39.3
FAN21G1863 Fragaria x ananassa HOM05D001602 ORTHO05D001470 4.6e-09 64.7 111 36.9
CDE09G0573 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 1.0e-08 63.5 110 37.3
Manes.04G014600 Manihot esculenta HOM05D001602 ORTHO05D001470 1.3e-08 63.2 108 40.7
arahy.Tifrunner.gnm1.ann1.T06XUN Arachis hypogaea HOM05D001602 ORTHO05D001470 1.7e-08 62.8 100 39.0
CAN.G546.20 Capsicum annuum HOM05D001602 ORTHO05D001470 2.3e-08 62.4 108 40.7
Migut.D02282 Erythranthe guttata HOM05D001602 ORTHO05D001470 2.3e-08 62.4 98 39.8
arahy.Tifrunner.gnm1.ann1.XS70FB Arachis hypogaea HOM05D001602 ORTHO05D001470 3.9e-08 61.6 100 39.0
Sabra09G0003900 Salix brachista HOM05D001602 ORTHO05D001470 3.9e-08 61.6 110 36.4
Atru.chr3.3538 Acer truncatum HOM05D001602 ORTHO05D001470 8.6e-08 60.5 112 33.9
MELO3C026904.2 Cucumis melo HOM05D001602 ORTHO05D001470 1.1e-07 60.1 108 36.1
Nitab4.5_0000329g0250 Nicotiana tabacum HOM05D001602 ORTHO05D001470 1.1e-07 60.1 114 42.1
Sed0025563 Sechium edule HOM05D001602 ORTHO05D001470 1.5e-07 59.7 100 42.0
COL.COLO4_21203 Corchorus olitorius HOM05D001602 ORTHO05D001470 1.9e-07 59.3 115 38.3
SalBow3G3662 Salvia bowleyana HOM05D001602 ORTHO05D001470 1.9e-07 59.3 99 39.4
PGSC0003DMG400019626 Solanum tuberosum HOM05D001602 ORTHO05D001470 2.5e-07 58.9 110 38.2
ClCG02G021480 Citrullus lanatus HOM05D001602 ORTHO05D001470 3.3e-07 58.5 107 37.4
FvH4_3g30920 Fragaria vesca HOM05D001602 ORTHO05D001470 3.3e-07 58.5 111 34.2
Lalb_Chr03g0027651 Lupinus albus HOM05D001602 ORTHO05D001470 4.3e-07 58.2 103 39.8
Rhsim13G0099500 Rhododendron simsii HOM05D001602 ORTHO05D001470 4.3e-07 58.2 111 35.1
Aqoxy2G01738 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 5.6e-07 57.8 107 39.3
Lj3g0021801 Lotus japonicus HOM05D001602 ORTHO05D001470 5.6e-07 57.8 104 40.4
ECA233G5032 Erigeron canadensis HOM05D001602 ORTHO05D001470 9.5e-07 57.0 99 40.4
Nitab4.5_0005092g0040 Nicotiana tabacum HOM05D001602 ORTHO05D001470 9.5e-07 57.0 113 38.9
unitig_746.g26635 Utricularia gibba HOM05D001602 ORTHO05D001470 1.2e-06 56.6 104 33.7
Lsat_1_v5_gn_6_44081 Lactuca sativa HOM05D001602 ORTHO05D001470 1.6e-06 56.2 98 38.8
PGR102G2720 Punica granatum HOM05D001602 ORTHO05D001470 1.6e-06 56.2 120 35.0
AUR62029201 Chenopodium quinoa HOM05D001602 ORTHO05D001470 2.1e-06 55.8 103 33.0
Ca_19306_v3 Cicer arietinum L. HOM05D001602 ORTHO05D001470 2.8e-06 55.5 113 37.2
Ciclev10029831m.g Citrus clementina HOM05D001602 ORTHO05D001470 2.8e-06 55.5 112 39.3
Eucgr.B03940 Eucalyptus grandis HOM05D001602 ORTHO05D001470 3.6e-06 55.1 125 36.8
RcHm_v2.0_Chr5g0057461 Rosa chinensis HOM05D001602 ORTHO05D001470 3.6e-06 55.1 126 36.5
Glyma.11G194000 Glycine max HOM05D001602 ORTHO05D001470 4.7e-06 54.7 103 40.8
HanXRQChr02g0055611 Helianthus annuus HOM05D001602 ORTHO05D001470 4.7e-06 54.7 98 35.7
Hund01472 Selenicereus undatus HOM05D001602 ORTHO05D001470 4.7e-06 54.7 108 36.1
SEGI_05589 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 4.7e-06 54.7 75 37.3
Sopen11g027700 Solanum pennellii HOM05D001602 ORTHO05D001470 4.7e-06 54.7 104 38.5
Zm00001eb258970 Zea mays HOM05D001602 ORTHO05D001470 4.7e-06 54.7 109 34.9
Phvul.011G084600 Phaseolus vulgaris HOM05D001602 ORTHO05D001470 6.2e-06 54.3 102 38.2
Solyc11g068990.3 Solanum lycopersicum HOM05D001602 ORTHO05D001470 6.2e-06 54.3 104 38.5
VMungo1127G0611 Vigna mungo HOM05D001602 ORTHO05D001470 6.2e-06 54.3 108 35.2
Dinv34729 Davidia involucrata HOM05D001602 ORTHO05D001470 8.1e-06 53.9 33 69.7
TPR.G6130 Trifolium pratense HOM05D001602 ORTHO05D001470 8.1e-06 53.9 109 36.7


User provided reference genes

Program Settings