Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 0.0e+00 1211.1 597 100.0
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 7.0e-238 827.4 535 78.1
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 9.2e-230 800.4 561 72.2
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 1.2e-229 800.0 601 69.2
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 1.6e-229 799.7 537 74.7
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 2.0e-229 799.3 537 74.9
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 2.0e-229 799.3 571 72.3
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 6.0e-229 797.7 573 70.0
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.0e-228 797.0 589 69.8
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 2.3e-228 795.8 602 69.4
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 6.6e-228 794.3 571 70.8
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 1.5e-227 793.1 570 70.7
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.3e-227 792.0 589 69.3
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 9.5e-227 790.4 537 73.7
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 9.5e-227 790.4 571 70.6
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 9.5e-227 790.4 525 74.9
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 4.7e-226 788.1 537 73.6
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 6.2e-226 787.7 536 73.9
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 6.2e-226 787.7 597 68.3
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 8.1e-226 787.3 538 74.2
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 1.1e-225 786.9 525 74.7
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 3.1e-225 785.4 587 68.5
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 5.2e-225 784.6 551 72.1
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 8.9e-225 783.9 615 67.2
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 1.2e-224 783.5 537 73.0
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 2.9e-223 778.9 568 70.2
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 1.1e-222 776.9 537 72.8
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 1.9e-222 776.2 526 73.8
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 3.2e-222 775.4 554 70.9
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 5.4e-222 774.6 538 72.9
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 7.1e-222 774.2 555 70.8
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 9.2e-222 773.9 559 69.9
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 1.6e-221 773.1 537 72.8
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 3.5e-221 771.9 558 70.1
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 3.5e-221 771.9 537 72.8
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 3.5e-221 771.9 535 71.8
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 4.6e-221 771.5 559 70.8
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 4.6e-221 771.5 561 69.7
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 6.0e-221 771.2 559 70.8
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 7.8e-221 770.8 537 72.8
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.0e-220 770.4 547 70.9
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 1.0e-220 770.4 577 69.8
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 2.3e-220 769.2 554 70.2
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 3.0e-220 768.8 537 71.9
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 3.9e-220 768.5 535 71.6
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 5.1e-220 768.1 558 69.7
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 6.6e-220 767.7 531 72.3
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 6.6e-220 767.7 590 66.8
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 8.6e-220 767.3 571 69.9
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 1.1e-219 766.9 538 72.7
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 1.1e-219 766.9 538 72.7
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 1.5e-219 766.5 603 66.5
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.5e-219 766.5 547 70.7
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 1.9e-219 766.1 537 71.9
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 7.3e-219 764.2 528 72.7
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 7.3e-219 764.2 583 67.8
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 9.5e-219 763.8 561 68.4
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.2e-218 763.5 573 69.3
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 2.8e-218 762.3 557 69.1
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 4.7e-218 761.5 537 71.1
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 4.7e-218 761.5 552 70.5
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 6.2e-218 761.1 524 72.7
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 6.2e-218 761.1 537 71.5
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 6.2e-218 761.1 603 66.8
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.4e-217 760.0 528 72.3
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 2.3e-217 759.2 556 68.9
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 5.2e-217 758.1 538 71.0
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 6.8e-217 757.7 603 66.7
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.2e-216 756.9 592 65.9
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.4e-216 755.4 537 71.7
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 9.9e-216 753.8 525 73.1
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 2.2e-215 752.7 537 70.8
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.9e-215 751.5 528 72.0
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.1e-214 750.4 525 72.0
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 5.4e-214 748.0 600 66.2
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 2.1e-213 746.1 541 70.1
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.0e-212 743.8 559 68.0
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 8.6e-212 740.7 552 69.2
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 5.6e-211 738.0 523 70.9
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 5.6e-211 738.0 581 66.6
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.3e-207 726.9 560 68.0
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 8.4e-207 724.2 595 64.2
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.1e-206 723.8 539 68.1
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.3e-204 716.1 558 67.0
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.1e-203 713.8 554 66.4
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 7.3e-203 711.1 587 64.4
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 9.6e-203 710.7 531 69.3
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 3.0e-196 689.1 571 64.6
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 7.4e-195 684.5 430 77.4
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 9.6e-195 684.1 537 66.9
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 1.1e-193 680.6 464 72.0
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 2.9e-191 672.5 559 64.8
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 1.1e-190 670.6 459 73.6
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.1e-190 670.6 554 63.5
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.7e-189 666.0 448 73.4
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 6.7e-188 661.4 446 72.6
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 1.1e-187 660.6 430 74.4
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.1e-187 660.6 494 67.2
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 2.5e-187 659.4 446 72.9
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.3e-186 657.1 430 74.9
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 4.8e-186 655.2 419 75.9
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.1e-182 644.0 513 64.1
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 9.0e-177 624.4 505 64.2
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 5.0e-175 618.6 580 59.0
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 6.5e-175 618.2 393 76.6
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 3.7e-170 602.4 523 59.8
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 6.3e-170 601.7 554 59.0
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 1.9e-166 590.1 579 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 2.6e-152 543.1 452 60.8
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 7.7e-152 541.6 387 72.9
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 7.8e-120 435.3 324 64.5
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.8e-85 319.7 200 78.0
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-79 301.2 257 61.1
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-61 241.9 274 46.7
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.7e-56 224.2 141 77.3
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 7.2e-49 199.5 207 51.2
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 8.8e-39 166.0 100 77.0
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 2.6e-35 154.5 145 57.9
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 7.2e-25 119.8 78 74.4
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 3.6e-24 117.5 82 72.0
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 6.8e-23 113.2 104 57.7
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 3.4e-22 110.9 66 75.8
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 3.4e-22 110.9 176 42.0
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 4.4e-22 110.5 72 72.2
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 1.4e-20 105.5 114 55.3
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 7.2e-17 93.2 68 70.6
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 9.5e-17 92.8 57 78.9
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 9.5e-17 92.8 57 78.9
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 2.8e-16 91.3 60 76.7
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 2.8e-16 91.3 60 76.7
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.8e-15 88.6 53 81.1
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 6.3e-13 80.1 98 45.9
VMungo1309G2893 Vigna mungo HOM05D003318 ORTHO05D004544 1.2e-06 59.3 375 25.3


User provided reference genes

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