Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 8.7e-73 276.9 146 100.0
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 2.0e-24 116.3 145 38.6
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 5.7e-24 114.8 147 43.5
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 5.7e-24 114.8 145 39.3
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 4.8e-23 111.7 138 44.9
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 4.8e-23 111.7 136 43.4
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 6.3e-23 111.3 138 42.8
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.1e-22 110.5 138 42.0
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 4.1e-22 108.6 137 40.9
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.2e-21 107.1 137 41.6
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 2.0e-21 106.3 138 39.1
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 3.4e-21 105.5 129 41.1
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 3.4e-21 105.5 138 38.4
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 1.0e-20 104.0 137 40.1
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 2.2e-20 102.8 126 42.9
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 2.9e-20 102.4 139 36.0
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 2.9e-20 102.4 138 39.9
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 3.8e-20 102.1 145 37.9
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 8.5e-20 100.9 130 39.2
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 8.5e-20 100.9 139 37.4
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 8.5e-20 100.9 138 38.4
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.9e-19 99.8 140 37.9
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 1.9e-19 99.8 139 38.8
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 2.5e-19 99.4 138 38.4
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.2e-19 99.0 130 39.2
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 4.2e-19 98.6 139 37.4
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 5.5e-19 98.2 138 38.4
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 5.5e-19 98.2 120 40.8
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 5.5e-19 98.2 138 39.1
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 9.4e-19 97.4 145 38.6
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 9.4e-19 97.4 138 38.4
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 9.4e-19 97.4 138 39.1
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 1.2e-18 97.1 145 37.2
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.6e-18 96.7 114 41.2
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 1.6e-18 96.7 122 40.2
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 2.1e-18 96.3 139 37.4
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 2.1e-18 96.3 137 38.7
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 2.7e-18 95.9 143 37.1
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 2.7e-18 95.9 118 40.7
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 2.7e-18 95.9 145 40.0
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 6.1e-18 94.7 139 36.0
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 6.1e-18 94.7 138 37.7
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 8.0e-18 94.4 118 40.7
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 8.0e-18 94.4 114 40.4
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 1.4e-17 93.6 129 37.2
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.8e-17 93.2 142 36.6
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 2.3e-17 92.8 139 33.8
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 6.7e-17 91.3 131 37.4
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 8.8e-17 90.9 114 40.4
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 8.8e-17 90.9 145 36.6
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 8.8e-17 90.9 114 39.5
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 8.8e-17 90.9 140 35.7
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 2.0e-16 89.7 129 38.8
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 2.0e-16 89.7 140 35.7
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 4.4e-16 88.6 117 39.3
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 5.7e-16 88.2 117 39.3
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 5.7e-16 88.2 117 39.3
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 7.4e-16 87.8 106 42.5
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 9.7e-16 87.4 144 34.0
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.3e-15 87.0 144 33.3
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 1.7e-15 86.7 106 41.5
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 8.2e-15 84.3 129 37.2
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 8.2e-15 84.3 139 33.8
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.1e-14 84.0 128 35.2
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.4e-14 83.6 106 37.7
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 2.4e-14 82.8 174 32.8
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.1e-14 82.4 130 37.7
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 4.1e-14 82.0 146 32.9
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 5.3e-14 81.6 144 35.4
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 7.0e-14 81.3 92 44.6
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.6e-13 80.1 89 46.1
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 3.5e-13 79.0 139 32.4
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.0e-12 77.4 141 36.2
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.0e-12 77.4 139 31.7
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 1.7e-12 76.6 139 30.9
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 2.9e-12 75.9 129 34.9
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 3.8e-12 75.5 96 37.5
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 3.8e-12 75.5 94 42.6
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 5.0e-12 75.1 112 36.6
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 4.2e-11 72.0 84 41.7
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 2.7e-10 69.3 121 30.6
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 3.6e-10 68.9 81 42.0
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 8.0e-10 67.8 106 34.0
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 2.3e-09 66.2 94 38.3
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 8.8e-09 64.3 129 30.2
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 8.8e-09 64.3 111 33.3
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.3e-08 62.4 89 36.0
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 5.7e-08 61.6 109 33.0
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 7.5e-08 61.2 89 34.8
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 2.2e-07 59.7 104 36.5
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 1.4e-06 57.0 54 50.0
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 1.4e-06 57.0 94 34.0


User provided reference genes

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