Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0585G058 Amborella trichopoda HOM05D000230 ORTHO05D000176 5.2e-34 147.1 74 100.0
Aqoxy4G00278 Aquilegia oxysepala HOM05D000230 ORTHO05D000176 1.6e-11 72.4 73 57.5
MBI07_g26362_MAGBIO Magnolia biondii HOM05D000230 ORTHO05D000176 5.3e-10 67.4 63 57.1
Nn3g20732 Nelumbo nucifera HOM05D000230 ORTHO05D000176 2.2e-08 62.0 69 55.1
TAR627G0522 Trochodendron aralioides HOM05D000230 ORTHO05D000176 4.9e-08 60.8 69 55.1
PSO541G2214 Papaver somniferum HOM05D000230 ORTHO05D000176 1.4e-07 59.3 74 50.0
PSO675G5819 Papaver somniferum HOM05D000230 ORTHO05D000176 4.2e-07 57.8 80 46.2
HPP92_008746 Vanilla planifolia HOM05D000230 ORTHO05D000176 2.1e-06 55.5 37 73.0
A10p25180 Brassica napus HOM05D000230 ORTHO05D000176 2.7e-06 55.1 60 50.0
C09p64090 Brassica napus HOM05D000230 ORTHO05D000176 2.7e-06 55.1 60 50.0
BolC9t59246H Brassica oleracea HOM05D000230 ORTHO05D000176 2.7e-06 55.1 60 50.0
BraA10t44580Z Brassica rapa HOM05D000230 ORTHO05D000176 2.7e-06 55.1 60 50.0
Os02g0247000 Oryza sativa ssp. japonica HOM05D000230 ORTHO05D000176 2.7e-06 55.1 41 65.9
MSTRG.6726 Avicennia marina HOM05D000230 ORTHO05D000176 3.5e-06 54.7 83 48.2
Manes.15G100800 Manihot esculenta HOM05D000230 ORTHO05D000176 3.5e-06 54.7 53 60.4
SEGI_26030 Sequoiadendron giganteum HOM05D000230 ORTHO05D000176 3.5e-06 54.7 58 53.4
CARHR200460 Cardamine hirsuta HOM05D000230 ORTHO05D000176 4.6e-06 54.3 60 48.3
Cpa.g.sc452.2 Carica papaya HOM05D000230 ORTHO05D000176 4.6e-06 54.3 42 59.5
Lj1C819G2 Lonicera japonica HOM05D000230 ORTHO05D000176 4.6e-06 54.3 38 71.1
Aa31LG3G14650 Aethionema arabicum HOM05D000230 ORTHO05D000176 6.0e-06 53.9 59 49.2
Pp3c9_4140 Physcomitrium patens HOM05D000230 ORTHO05D000176 6.0e-06 53.9 59 49.2
Pp3c9_4143 Physcomitrium patens HOM05D000230 ORTHO05D000176 6.0e-06 53.9 59 49.2
THA.LOC104799081 Tarenaya hassleriana HOM05D000230 ORTHO05D000176 6.0e-06 53.9 59 49.2
Cc01_g03610 Coffea canephora HOM05D000230 ORTHO05D000176 7.9e-06 53.5 62 50.0
Rhsim01G0186600 Rhododendron simsii HOM05D000230 ORTHO05D000176 7.9e-06 53.5 58 48.3


User provided reference genes

Program Settings