Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 2.9e-190 668.3 316 100.0
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 6.3e-153 544.3 310 82.3
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.0e-150 537.0 315 79.7
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 4.8e-145 518.1 315 74.3
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 4.8e-145 518.1 305 79.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.2e-143 513.5 320 75.0
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 2.0e-143 512.7 315 75.9
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.7e-142 509.6 314 73.2
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.9e-142 508.8 315 75.2
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 3.8e-142 508.4 316 74.7
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 5.0e-142 508.1 315 74.0
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 5.0e-142 508.1 316 73.1
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 8.5e-142 507.3 315 73.3
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.5e-141 506.5 315 73.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.9e-141 506.1 320 72.2
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 1.9e-141 506.1 315 72.4
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.2e-141 505.4 316 73.4
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 4.2e-141 505.0 315 73.7
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 5.5e-141 504.6 320 72.8
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 7.2e-141 504.2 318 73.3
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 7.2e-141 504.2 315 72.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 7.2e-141 504.2 315 72.4
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.2e-140 503.4 315 72.4
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.1e-140 502.7 315 70.8
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.7e-140 502.3 315 72.4
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.7e-140 502.3 315 74.6
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.7e-140 502.3 315 73.0
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 3.6e-140 501.9 315 72.4
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 3.6e-140 501.9 315 72.7
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 6.1e-140 501.1 315 74.0
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 6.1e-140 501.1 320 72.2
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 8.0e-140 500.7 320 71.6
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.4e-139 500.0 313 74.1
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.8e-139 499.6 315 72.1
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.3e-139 499.2 315 72.1
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.3e-139 499.2 315 72.1
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 3.0e-139 498.8 315 72.1
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 8.8e-139 497.3 305 76.4
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.2e-138 496.9 316 73.1
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 2.0e-138 496.1 317 71.3
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.6e-138 495.7 320 70.9
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 9.7e-138 493.8 317 71.6
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 9.7e-138 493.8 315 73.0
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 9.7e-138 493.8 316 72.8
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.7e-137 493.0 305 75.1
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 4.8e-137 491.5 315 69.8
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 6.3e-137 491.1 315 72.1
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 8.3e-137 490.7 315 72.1
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 8.3e-137 490.7 316 72.5
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 1.1e-136 490.3 315 71.1
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 2.4e-136 489.2 315 69.5
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 2.4e-136 489.2 317 71.0
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 3.1e-136 488.8 317 70.3
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 7.0e-136 487.6 305 73.8
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 9.1e-136 487.3 316 70.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 2.0e-135 486.1 315 70.8
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.5e-135 485.3 308 73.7
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 3.5e-135 485.3 315 70.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 3.5e-135 485.3 313 71.9
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 4.5e-135 485.0 317 70.7
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.0e-134 483.8 317 70.3
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.9e-134 482.3 305 73.1
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 5.0e-134 481.5 317 70.3
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 8.5e-134 480.7 314 72.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 1.5e-133 479.9 315 71.1
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.5e-133 479.9 314 72.0
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.5e-133 479.2 320 70.0
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 7.2e-133 477.6 333 67.6
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 7.2e-133 477.6 333 67.6
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.1e-132 476.1 305 72.1
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 2.1e-132 476.1 315 70.2
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 4.7e-132 474.9 330 67.9
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 5.2e-131 471.5 297 72.4
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.5e-130 469.9 305 70.5
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 4.4e-130 468.4 312 68.9
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 4.4e-130 468.4 315 68.3
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 5.7e-130 468.0 318 68.9
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 2.8e-129 465.7 295 70.5
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 7.0e-128 461.1 303 69.3
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.2e-127 460.3 303 69.3
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 5.9e-127 458.0 323 65.0
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.0e-126 457.2 320 66.9
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 3.8e-126 455.3 305 68.5
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 1.1e-125 453.8 310 68.1
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 1.3e-121 440.3 253 77.5
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 3.7e-121 438.7 315 64.8
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.4e-120 436.8 315 66.0
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 3.2e-120 435.6 310 65.2
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 9.2e-120 434.1 255 76.1
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 5.9e-119 431.4 304 67.1
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.0e-118 430.6 306 64.1
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.5e-117 426.8 315 65.4
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 4.3e-117 425.2 301 65.4
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 1.2e-116 423.7 309 62.8
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.0e-115 420.6 256 74.2
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 4.4e-114 415.2 254 72.8
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 4.4e-114 415.2 307 65.5
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.1e-112 410.6 308 61.7
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 9.5e-109 397.5 319 60.8
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.8e-107 393.3 254 72.0
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 9.2e-104 380.9 315 61.6
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.0e-102 377.5 263 65.4
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 4.6e-95 352.1 226 69.0
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 3.9e-94 349.0 220 74.1
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.9e-93 346.7 316 54.7
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 2.8e-92 342.8 198 78.8
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 2.3e-62 243.4 144 80.6
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 3.0e-62 243.0 155 69.0
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 5.7e-53 212.2 132 73.5
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 2.0e-50 203.8 313 39.3
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 3.0e-46 189.9 257 41.2
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 6.9e-43 178.7 124 62.9
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.3e-41 174.5 304 35.5
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 2.2e-33 147.1 111 62.2
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-33 147.1 111 67.6
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 4.0e-30 136.3 133 52.6
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.7e-28 131.0 78 79.5
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 2.6e-26 123.6 83 60.2
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.2e-23 114.8 68 67.6
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.8e-20 103.6 53 86.8
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 1.1e-16 91.7 72 55.6
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 2.0e-10 70.9 61 55.7
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 3.5e-10 70.1 61 55.7
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.6e-07 61.2 34 70.6
Lsat_1_v5_gn_9_104061 Lactuca sativa HOM05D004982 ORTHO05D002186 6.8e-06 55.8 140 28.6


User provided reference genes

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