Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 2.3e-117 425.6 227 100.0
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.8e-69 266.5 209 69.4
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 2.4e-69 266.2 209 69.4
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 1.2e-68 263.8 227 65.6
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 3.4e-68 262.3 218 65.6
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 1.9e-66 256.5 233 64.4
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 3.2e-66 255.8 214 67.3
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 5.5e-66 255.0 231 62.3
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 7.1e-66 254.6 232 62.5
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 2.7e-65 252.7 194 69.6
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 4.6e-65 251.9 189 71.4
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 6.1e-65 251.5 233 60.1
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 6.1e-65 251.5 187 69.0
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 6.1e-65 251.5 225 63.6
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 6.1e-65 251.5 227 62.1
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 6.1e-65 251.5 215 66.5
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 1.0e-64 250.8 230 61.7
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 1.8e-64 250.0 183 72.1
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 5.1e-64 248.4 200 68.5
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 6.7e-64 248.1 198 66.7
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 6.7e-64 248.1 195 68.2
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 1.1e-63 247.3 155 79.4
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 1.1e-63 247.3 233 60.5
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 1.1e-63 247.3 231 59.7
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 1.9e-63 246.5 210 66.7
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 3.3e-63 245.7 194 66.5
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 5.7e-63 245.0 227 61.2
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 7.4e-63 244.6 239 57.3
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 9.7e-63 244.2 155 77.4
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 9.7e-63 244.2 187 69.0
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 6.3e-62 241.5 218 60.6
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 1.4e-61 240.4 159 73.6
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 1.8e-61 240.0 236 58.5
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 3.1e-61 239.2 236 58.9
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 3.1e-61 239.2 212 62.7
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 4.1e-61 238.8 164 73.2
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 5.3e-61 238.4 186 65.1
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 5.3e-61 238.4 219 59.4
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 6.9e-61 238.0 187 66.8
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 9.0e-61 237.7 236 58.9
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.5e-60 236.9 219 60.3
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 2.0e-60 236.5 213 60.1
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 2.6e-60 236.1 183 68.3
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 3.4e-60 235.7 220 60.0
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 3.4e-60 235.7 191 63.9
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.4e-60 235.7 191 63.9
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.4e-60 235.7 191 63.9
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 4.5e-60 235.3 214 61.7
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 4.5e-60 235.3 220 58.6
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 1.3e-59 233.8 184 67.9
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 1.3e-59 233.8 190 63.2
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 2.2e-59 233.0 230 57.4
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 3.8e-59 232.3 227 60.4
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 1.9e-58 229.9 204 62.3
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.2e-58 229.2 186 64.5
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 4.6e-57 225.3 211 59.7
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 7.9e-57 224.6 155 71.0
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.8e-56 223.4 215 57.7
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 7.4e-55 218.0 185 67.0
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 5.3e-53 211.8 278 47.1
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 1.1e-50 204.1 153 65.4
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 9.4e-50 201.1 152 64.5
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 8.5e-43 177.9 185 53.5
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 1.1e-39 167.5 96 82.3
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 1.2e-31 141.0 236 41.9
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 5.7e-31 138.7 199 45.2
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 5.7e-31 138.7 86 79.1
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.7e-22 109.4 102 53.9
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 2.4e-21 106.7 135 42.2
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.6e-20 104.0 138 42.8
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.8e-13 80.5 56 71.4
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 2.4e-13 80.1 58 69.0
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 4.1e-13 79.3 103 44.7
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 5.4e-13 79.0 103 43.7
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 7.0e-13 78.6 47 78.7
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 9.2e-13 78.2 72 59.7
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 2.3e-11 73.6 47 74.5
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 5.6e-10 68.9 47 72.3
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 1.6e-09 67.4 134 38.8
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 3.4e-07 59.7 179 29.1
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 2.9e-06 56.6 92 33.7
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 6.4e-06 55.5 29 89.7
MCO04G075 Micromonas commoda HOM05D016594 ORTHO05D018380 6.4e-06 55.5 97 35.1
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 8.3e-06 55.1 92 32.6


User provided reference genes

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