Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 1.1e-161 573.2 285 100.0
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 2.1e-83 313.2 287 57.1
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 2.4e-82 309.7 276 56.5
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 1.7e-80 303.5 270 58.5
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.6e-78 297.0 280 54.6
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 4.6e-78 295.4 288 53.8
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 7.8e-78 294.7 291 52.9
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 5.1e-77 292.0 293 53.9
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 8.7e-77 291.2 283 55.1
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 1.5e-76 290.4 294 52.4
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 3.3e-76 289.3 286 53.5
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 7.3e-76 288.1 293 51.2
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 1.2e-75 287.3 286 53.1
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 4.0e-74 282.3 277 55.6
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 9.0e-74 281.2 273 53.5
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 2.0e-73 280.0 275 53.5
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 3.4e-73 279.3 276 51.4
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 3.8e-72 275.8 271 50.9
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 4.9e-72 275.4 276 52.2
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 6.4e-72 275.0 278 50.4
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 1.6e-70 270.4 269 52.8
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 2.7e-70 269.6 259 51.7
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 3.5e-70 269.2 287 49.1
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 4.6e-70 268.9 289 50.2
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 4.6e-70 268.9 282 52.1
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 6.0e-70 268.5 286 49.7
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 1.7e-69 266.9 288 50.0
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 3.0e-69 266.2 275 51.3
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 5.1e-69 265.4 288 49.7
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 8.7e-69 264.6 275 50.2
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 1.1e-68 264.2 295 48.5
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 1.5e-68 263.8 283 52.7
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 3.3e-68 262.7 277 48.7
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 9.6e-68 261.2 279 48.4
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.1e-67 260.0 275 49.8
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 3.6e-67 259.2 289 51.2
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 4.0e-66 255.8 270 51.1
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 5.3e-66 255.4 277 48.0
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 2.6e-65 253.1 273 49.8
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 2.6e-65 253.1 278 48.6
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 3.4e-65 252.7 270 50.7
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 5.8e-65 251.9 277 48.0
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 1.7e-64 250.4 280 48.9
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 2.2e-64 250.0 273 47.3
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 2.2e-64 250.0 312 45.8
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 2.9e-64 249.6 256 52.3
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 3.8e-64 249.2 286 46.5
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 3.8e-64 249.2 286 46.5
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 6.4e-64 248.4 270 48.5
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 6.4e-64 248.4 272 48.5
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 1.1e-63 247.7 291 46.4
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 1.9e-63 246.9 274 47.1
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 2.4e-63 246.5 297 47.5
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 4.2e-63 245.7 294 46.6
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 5.4e-63 245.4 270 47.8
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 7.1e-63 245.0 270 48.1
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 9.3e-63 244.6 286 46.5
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 1.2e-62 244.2 247 52.2
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 1.2e-62 244.2 274 47.1
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 2.1e-62 243.4 293 46.4
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 3.5e-62 242.7 275 46.5
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 4.6e-62 242.3 298 46.0
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 6.0e-62 241.9 293 46.1
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 7.9e-62 241.5 287 44.3
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 7.9e-62 241.5 349 42.1
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 7.9e-62 241.5 291 45.0
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 2.3e-61 240.0 292 46.6
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 2.3e-61 240.0 339 41.9
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 3.9e-61 239.2 277 46.9
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 6.7e-61 238.4 283 48.8
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 4.8e-59 232.3 276 46.0
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 4.8e-59 232.3 282 47.5
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 2.6e-57 226.5 280 45.4
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 1.7e-56 223.8 236 49.2
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 4.2e-55 219.2 275 45.5
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 1.2e-54 217.6 217 50.7
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 4.5e-49 199.1 294 41.5
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 8.4e-48 194.9 285 41.8
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 1.9e-47 193.7 281 40.6
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 3.5e-46 189.5 277 42.2
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 5.5e-39 165.6 109 72.5
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 1.2e-38 164.5 259 39.0
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 1.6e-38 164.1 209 43.1
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 3.6e-38 162.9 116 68.1
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 6.1e-38 162.2 109 70.6
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 3.0e-37 159.8 108 70.4
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.8e-34 150.6 149 52.3
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 8.5e-32 141.7 148 52.0
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 3.6e-30 136.3 104 64.4
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 6.7e-29 132.1 103 64.1
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 7.4e-28 128.6 107 56.1
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 1.1e-23 114.8 282 34.4
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 5.9e-17 92.4 155 37.4
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 6.8e-13 79.0 57 70.2
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 1.4e-10 71.2 367 22.9
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 3.8e-08 63.2 52 57.7


User provided reference genes

Program Settings