Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 4.6e-152 541.2 273 100.0
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 5.1e-111 404.8 272 73.5
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.4e-105 384.0 269 71.0
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.4e-105 384.0 269 71.0
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.0e-103 380.6 271 70.8
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 5.7e-102 374.8 260 72.3
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 2.2e-101 372.9 269 69.1
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 8.2e-101 370.9 265 67.9
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.4e-100 370.2 269 69.5
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 7.0e-100 367.9 274 69.3
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 9.1e-100 367.5 265 67.2
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.6e-99 366.7 265 66.8
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.6e-99 366.7 264 67.4
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.0e-99 366.3 267 67.0
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 4.5e-99 365.2 273 67.4
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.3e-98 363.6 272 66.9
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 2.9e-98 362.5 270 65.6
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 8.5e-98 360.9 262 67.6
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 8.5e-98 360.9 263 69.2
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.5e-97 360.1 255 69.4
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 1.5e-97 360.1 268 65.7
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 3.2e-97 359.0 258 67.8
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 3.2e-97 359.0 263 69.2
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 7.2e-97 357.8 273 67.0
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 7.2e-97 357.8 265 68.7
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 9.4e-97 357.5 267 67.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 2.7e-96 355.9 271 64.6
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 2.7e-96 355.9 273 67.4
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 4.7e-96 355.1 265 67.9
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.0e-95 354.0 265 67.9
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.4e-95 353.6 262 67.6
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.8e-95 353.2 264 67.0
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.8e-95 353.2 262 66.0
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.0e-95 352.4 269 65.1
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 4.0e-95 352.1 264 65.9
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 2.0e-94 349.7 261 66.7
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 2.0e-94 349.7 263 67.7
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.2e-93 346.3 255 67.5
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 2.2e-93 346.3 270 65.6
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 2.8e-93 345.9 270 64.4
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 2.8e-93 345.9 270 64.8
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 3.7e-93 345.5 262 67.2
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 3.7e-93 345.5 253 68.4
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 4.8e-93 345.1 255 67.8
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.8e-93 345.1 255 67.8
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 6.3e-93 344.7 260 63.8
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 6.3e-93 344.7 263 67.3
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 1.4e-92 343.6 270 62.6
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.4e-92 343.6 274 63.5
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.8e-92 343.2 260 63.5
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.8e-92 343.2 260 63.8
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.1e-92 342.4 286 63.3
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 3.1e-92 342.4 343 55.4
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 7.0e-92 341.3 262 66.4
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 1.6e-91 340.1 260 66.2
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 2.7e-91 339.3 267 64.8
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.7e-91 339.3 255 67.5
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 3.5e-91 339.0 260 65.0
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 3.5e-91 339.0 262 64.5
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.0e-90 337.4 255 66.7
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.0e-90 337.4 270 64.4
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.3e-90 337.0 276 65.2
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.7e-90 336.7 263 66.5
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 5.0e-90 335.1 274 64.6
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 5.0e-90 335.1 274 64.6
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 6.5e-90 334.7 276 61.6
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.9e-89 333.2 262 64.1
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.9e-89 333.2 262 64.1
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.9e-89 333.2 265 65.3
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 3.2e-89 332.4 260 64.2
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 3.2e-89 332.4 260 64.2
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 3.2e-89 332.4 276 63.8
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 1.2e-88 330.5 260 63.8
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 1.4e-87 327.0 266 62.0
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 2.3e-87 326.2 273 61.2
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 3.0e-87 325.9 274 63.1
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 4.0e-87 325.5 271 64.2
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 6.8e-87 324.7 273 60.8
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 6.8e-87 324.7 263 63.9
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 6.8e-87 324.7 269 63.6
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.0e-86 323.2 278 62.2
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 4.4e-86 322.0 280 63.9
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 5.7e-86 321.6 271 61.6
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.7e-85 320.1 269 63.2
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.7e-85 318.9 272 65.1
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.4e-84 317.0 279 60.2
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.6e-83 313.5 269 62.5
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 3.3e-81 305.8 265 58.1
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.2e-72 277.3 263 56.7
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 6.4e-69 265.0 189 69.3
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.2e-67 260.8 178 69.7
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 6.2e-64 248.4 169 71.6
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 2.3e-63 246.5 168 69.6
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.4e-60 237.3 268 47.4
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.0e-58 231.1 169 68.6
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.9e-57 226.9 170 67.6
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.5e-57 226.5 268 45.5
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 4.7e-56 222.2 170 65.9
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 6.2e-56 221.9 160 66.9
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.0e-55 219.2 265 47.9
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 9.2e-52 208.0 268 45.1
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 4.6e-51 205.7 260 46.2
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.3e-50 203.4 176 60.8
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 3.9e-50 202.6 135 71.9
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.0e-47 192.6 217 51.2
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 4.2e-44 182.6 272 41.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.0e-38 163.7 272 40.4
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.4e-30 136.3 128 57.8
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 3.3e-25 119.8 92 62.0
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.1e-24 117.1 78 74.4
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.6e-22 110.2 265 32.5
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 4.5e-22 109.4 148 42.6
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 8.7e-18 95.1 78 61.5
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 9.6e-17 91.7 77 57.1
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.3e-16 91.3 173 39.3
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.1e-16 90.5 135 42.2
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.3e-13 81.3 65 58.5
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.9e-13 80.1 63 63.5
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 8.2e-08 62.0 75 44.0


User provided reference genes

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