Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.1e-201 706.4 356 100.0
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 2.3e-135 486.1 302 79.8
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 5.1e-135 485.0 318 76.7
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 4.3e-134 481.9 335 72.8
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 3.7e-133 478.8 336 74.1
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 8.1e-133 477.6 303 79.9
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.1e-132 477.2 301 79.4
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.1e-132 477.2 307 77.5
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.4e-132 476.9 317 76.3
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.4e-132 476.1 304 78.9
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 9.0e-132 474.2 337 74.2
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 4.5e-131 471.9 304 78.0
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 4.5e-131 471.9 303 77.6
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 7.6e-131 471.1 335 73.4
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 2.2e-130 469.5 314 74.8
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 3.8e-130 468.8 303 76.9
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 6.5e-130 468.0 306 77.5
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.4e-129 466.8 300 78.7
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 9.3e-129 464.2 301 79.4
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 9.3e-129 464.2 307 75.9
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.2e-128 463.8 301 77.7
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 2.1e-128 463.0 300 78.0
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 4.6e-128 461.8 327 72.8
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 4.6e-128 461.8 304 76.6
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 1.0e-127 460.7 303 77.2
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 1.0e-127 460.7 319 74.9
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.3e-127 460.3 326 73.6
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.8e-127 459.9 309 75.1
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.8e-127 459.9 304 77.0
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 2.3e-127 459.5 332 72.0
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.9e-127 458.8 301 77.7
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 8.7e-127 457.6 306 75.8
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.1e-126 457.2 303 76.6
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.5e-126 456.8 303 76.6
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.9e-126 456.4 313 73.8
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.3e-126 455.7 304 74.7
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 3.3e-126 455.7 360 66.4
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 4.3e-126 455.3 319 72.4
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 5.7e-126 454.9 304 75.7
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 5.7e-126 454.9 360 66.7
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 7.4e-126 454.5 304 74.3
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.6e-125 453.4 301 75.7
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.6e-125 453.4 309 74.4
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.1e-125 453.0 308 76.0
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 2.8e-125 452.6 315 71.7
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.8e-125 452.6 329 72.0
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.8e-125 452.6 329 71.7
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 3.7e-125 452.2 327 71.6
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 4.8e-125 451.8 303 74.3
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 6.2e-125 451.4 418 60.5
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 6.2e-125 451.4 318 73.3
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.1e-124 450.7 305 74.8
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 1.4e-124 450.3 323 73.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.8e-124 449.9 303 74.9
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 5.3e-124 448.4 301 74.4
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 6.9e-124 448.0 303 74.9
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 1.2e-123 447.2 305 75.4
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.5e-123 446.8 326 70.9
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.5e-123 446.8 326 70.9
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 2.0e-123 446.4 301 75.1
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 2.0e-123 446.4 330 69.7
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 4.5e-123 445.3 301 75.1
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 2.2e-122 443.0 303 73.6
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 6.5e-122 441.4 307 73.0
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 6.5e-122 441.4 307 73.0
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 6.5e-122 441.4 303 74.6
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 8.4e-122 441.0 331 69.5
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 1.4e-121 440.3 307 73.3
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 2.5e-121 439.5 307 72.6
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 3.2e-121 439.1 307 73.3
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 7.2e-121 438.0 307 73.0
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 3.9e-119 432.2 283 76.7
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 7.4e-118 427.9 297 74.7
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.6e-117 426.8 302 73.2
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 2.8e-117 426.0 285 75.1
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 8.2e-117 424.5 303 72.9
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.4e-116 423.7 300 72.0
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 2.4e-116 422.9 305 70.5
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 2.4e-116 422.9 303 71.3
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 5.9e-115 418.3 304 72.0
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.7e-114 416.8 463 52.9
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 2.5e-113 412.9 307 69.4
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 9.4e-113 411.0 296 71.6
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.1e-112 409.8 308 66.9
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 7.9e-112 407.9 267 76.0
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 2.3e-111 406.4 397 57.2
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 1.5e-107 393.7 332 62.0
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.3e-103 379.8 289 67.1
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.8e-98 362.5 211 84.8
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 4.2e-97 359.0 289 66.4
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 1.5e-94 350.5 402 50.2
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 4.4e-94 349.0 306 60.8
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.2e-89 331.6 210 80.0
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 1.0e-82 311.2 200 78.5
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.7e-82 310.5 317 54.9
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 4.2e-81 305.8 304 56.2
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 8.3e-77 291.6 203 74.4
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 7.0e-76 288.5 169 84.6
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 9.2e-76 288.1 219 67.6
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 5.9e-75 285.4 219 67.1
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.1e-72 276.9 194 74.2
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.7e-72 275.8 194 73.7
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 6.8e-71 271.9 161 83.2
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 4.9e-69 265.8 324 49.7
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.2e-67 261.2 258 50.8
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.7e-66 257.3 194 71.6
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.2e-64 251.1 166 76.5
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.9e-61 239.2 149 79.9
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.0e-58 231.5 188 64.4
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 4.0e-55 219.5 144 72.9
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 8.9e-55 218.4 259 47.9
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.2e-54 218.0 154 70.8
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.9e-50 203.0 141 70.9
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.5e-41 174.5 108 79.6
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.2e-35 154.8 95 77.9
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 3.3e-33 146.7 235 39.1
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 4.0e-31 139.8 121 62.0
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.1e-25 121.7 80 77.5
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 6.9e-23 112.5 258 35.3
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.8e-22 109.4 103 50.5
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 5.8e-14 82.8 51 72.5
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.7e-11 73.9 58 67.2
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 4.8e-08 63.2 86 48.8


User provided reference genes

Program Settings