Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.3e-76 289.7 144 100.0
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 3.7e-36 155.2 96 74.0
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 4.9e-36 154.8 91 75.8
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 1.4e-35 153.3 93 76.3
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.4e-35 153.3 94 75.5
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 2.4e-35 152.5 91 75.8
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 4.1e-35 151.8 91 74.7
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 7.1e-35 151.0 93 74.2
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 7.1e-35 151.0 91 76.9
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 9.2e-35 150.6 94 74.5
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 9.2e-35 150.6 94 74.5
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.6e-34 149.8 94 73.4
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.1e-34 149.4 94 71.3
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.1e-34 149.4 94 71.3
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.5e-34 148.7 94 73.4
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 3.5e-34 148.7 88 77.3
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 6.0e-34 147.9 94 71.3
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 6.0e-34 147.9 93 71.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 6.0e-34 147.9 91 72.5
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 6.0e-34 147.9 91 71.4
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.0e-33 147.1 91 70.3
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.3e-33 146.7 92 69.6
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.7e-33 146.4 95 71.6
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.7e-33 146.4 94 71.3
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.3e-33 146.0 91 69.2
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 3.0e-33 145.6 92 71.7
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 3.0e-33 145.6 91 71.4
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 3.0e-33 145.6 94 70.2
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 5.1e-33 144.8 96 69.8
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 5.1e-33 144.8 91 71.4
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 6.6e-33 144.4 91 72.5
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 6.6e-33 144.4 90 67.8
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 8.6e-33 144.1 90 68.9
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.1e-32 143.7 94 68.1
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.1e-32 143.7 94 68.1
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.1e-32 143.7 94 68.1
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.1e-32 143.7 95 69.5
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.9e-32 142.9 91 70.3
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.9e-32 142.9 91 70.3
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.3e-32 142.1 88 69.3
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 4.3e-32 141.7 87 72.4
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 4.3e-32 141.7 91 68.1
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 4.3e-32 141.7 94 68.1
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 5.6e-32 141.4 100 64.0
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 7.3e-32 141.0 94 67.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 7.3e-32 141.0 96 67.7
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 9.5e-32 140.6 96 65.6
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.2e-31 140.2 91 68.1
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.2e-31 140.2 91 70.3
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.2e-31 140.2 91 69.2
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 1.2e-31 140.2 93 68.8
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.2e-31 140.2 87 73.6
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.1e-31 139.4 96 64.6
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 2.1e-31 139.4 96 65.6
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.8e-31 139.0 93 68.8
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 2.8e-31 139.0 88 70.5
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 3.6e-31 138.7 96 65.6
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 4.7e-31 138.3 91 68.1
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 4.7e-31 138.3 91 68.1
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 8.1e-31 137.5 97 67.0
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.1e-30 137.1 97 64.9
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.1e-30 137.1 92 69.6
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 1.4e-30 136.7 102 59.8
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.4e-30 136.7 94 67.0
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 1.4e-30 136.7 90 64.4
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.8e-30 136.3 100 61.0
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.8e-30 136.3 91 69.2
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.8e-30 136.3 91 67.0
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.4e-30 136.0 91 69.2
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 3.1e-30 135.6 91 67.0
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 4.0e-30 135.2 91 70.3
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 4.0e-30 135.2 95 64.2
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 5.2e-30 134.8 91 70.3
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 5.2e-30 134.8 91 70.3
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 6.8e-30 134.4 91 69.2
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 8.9e-30 134.0 91 67.0
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 8.9e-30 134.0 94 66.0
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.2e-29 133.7 91 69.2
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 1.2e-29 133.7 94 64.9
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.2e-29 133.7 91 65.9
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.5e-29 133.3 88 68.2
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 7.6e-29 131.0 91 64.8
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 7.6e-29 131.0 129 54.3
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.3e-28 130.2 91 67.0
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.7e-28 129.8 88 67.0
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.7e-28 129.8 93 62.4
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 2.2e-28 129.4 91 64.8
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 2.9e-28 129.0 92 63.0
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.9e-28 128.3 91 63.7
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-27 127.1 88 64.8
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 1.4e-27 126.7 88 65.9
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 1.4e-27 126.7 88 65.9
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 2.4e-27 125.9 104 57.7
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 5.4e-27 124.8 83 68.7
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 7.1e-27 124.4 77 76.6
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 3.5e-26 122.1 97 59.8
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 4.6e-26 121.7 92 59.8
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 6.0e-26 121.3 81 72.8
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.0e-25 120.6 80 68.8
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 3.0e-25 119.0 80 70.0
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 2.5e-24 115.9 82 65.9
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 1.4e-22 110.2 94 52.1
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 4.4e-21 105.1 58 79.3
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 5.8e-21 104.8 58 77.6
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 5.8e-21 104.8 97 52.6
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 4.2e-19 98.6 63 68.3
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 4.2e-19 98.6 89 51.7
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 5.4e-19 98.2 84 57.1
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 7.1e-19 97.8 63 69.8
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 9.3e-19 97.4 105 46.7
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 3.5e-18 95.5 69 60.9
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.6e-15 86.7 109 38.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.6e-15 86.7 63 60.3
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 4.0e-14 82.0 91 45.1
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.3e-12 77.0 97 44.3
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 2.9e-12 75.9 192 28.1
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 1.2e-10 70.5 44 68.2
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.6e-10 70.1 50 62.0


User provided reference genes

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