Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 7.1e-105 384.0 206 100.0
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 1.2e-67 260.4 200 69.0
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 5.0e-66 255.0 200 69.0
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 2.2e-61 239.6 203 64.5
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 8.2e-61 237.7 200 63.5
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 8.2e-61 237.7 207 62.8
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 1.4e-60 236.9 204 62.3
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 5.3e-60 235.0 202 63.9
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 6.9e-60 234.6 207 61.8
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 2.6e-59 232.6 203 63.5
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 2.6e-59 232.6 201 62.2
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 1.7e-58 229.9 200 62.0
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 5.0e-58 228.4 210 61.4
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 1.4e-57 226.9 201 62.2
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 3.2e-57 225.7 205 61.0
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 2.7e-56 222.6 215 60.5
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 3.6e-56 222.2 202 60.9
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 3.6e-56 222.2 176 65.3
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 4.7e-56 221.9 206 60.7
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 1.0e-55 220.7 200 60.0
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 1.4e-55 220.3 202 60.9
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.4e-55 220.3 199 59.8
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.4e-55 220.3 199 59.8
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 1.8e-55 219.9 202 58.9
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 1.8e-55 219.9 205 61.5
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 3.9e-55 218.8 205 61.0
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 3.9e-55 218.8 207 60.4
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 5.2e-55 218.4 202 58.9
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 5.2e-55 218.4 171 65.5
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 6.7e-55 218.0 203 62.1
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 6.7e-55 218.0 201 61.7
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 8.8e-55 217.6 206 59.2
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 8.8e-55 217.6 201 59.2
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 2.0e-54 216.5 202 58.9
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 3.3e-54 215.7 201 59.7
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 3.3e-54 215.7 197 57.4
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 5.7e-54 214.9 203 57.6
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 5.7e-54 214.9 200 59.5
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.3e-53 213.8 202 59.4
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 1.3e-53 213.8 198 59.1
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 1.3e-53 213.8 201 58.2
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.1e-52 210.7 204 55.9
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 1.1e-52 210.7 163 67.5
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.1e-52 209.1 206 57.8
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 5.3e-52 208.4 199 58.3
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 9.1e-52 207.6 202 57.4
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 9.1e-52 207.6 172 65.1
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 9.1e-52 207.6 205 57.6
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 1.2e-51 207.2 213 54.0
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 7.7e-51 204.5 168 66.1
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 3.8e-50 202.2 198 58.6
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 3.8e-50 202.2 163 63.8
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 1.1e-49 200.7 200 56.5
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 1.9e-49 199.9 214 53.7
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 3.2e-49 199.1 202 55.9
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 7.2e-49 198.0 204 55.4
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 7.2e-49 198.0 198 55.6
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 1.2e-48 197.2 204 55.4
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 1.2e-48 197.2 201 55.2
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 1.6e-48 196.8 176 59.7
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 3.6e-48 195.7 181 56.9
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 3.6e-48 195.7 200 56.5
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.4e-47 193.7 217 52.1
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 3.0e-47 192.6 181 55.8
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 3.0e-47 192.6 185 55.1
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 6.7e-47 191.4 168 61.3
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 2.0e-46 189.9 216 50.0
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 9.7e-46 187.6 181 55.2
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 1.1e-44 184.1 177 53.7
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 1.2e-43 180.6 185 51.4
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 1.6e-43 180.3 203 51.2
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 2.0e-43 179.9 203 51.7
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 2.7e-43 179.5 201 52.7
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 6.5e-42 174.9 206 49.0
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 8.5e-42 174.5 245 46.5
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.1e-41 174.1 196 52.0
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 1.1e-41 174.1 203 49.3
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.2e-40 170.6 151 60.3
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 1.2e-40 170.6 210 50.5
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 2.7e-40 169.5 200 50.0
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 4.7e-40 168.7 203 48.8
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 4.7e-40 168.7 203 48.8
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 2.3e-39 166.4 164 55.5
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 4.0e-39 165.6 139 62.6
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 5.2e-39 165.2 139 62.6
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.2e-38 164.1 205 49.8
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.2e-38 164.1 140 61.4
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 1.2e-38 164.1 206 48.5
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 3.4e-38 162.5 151 59.6
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 5.7e-38 161.8 137 60.6
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 7.5e-38 161.4 150 58.7
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 1.4e-36 157.1 150 58.0
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 1.3e-34 150.6 215 46.0
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 2.3e-34 149.8 149 55.0
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 3.8e-34 149.1 190 45.3
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 4.2e-33 145.6 152 53.3
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 9.5e-33 144.4 149 53.7
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 1.0e-31 141.0 168 48.2
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 1.8e-31 140.2 140 56.4
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.8e-31 140.2 164 48.8
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 4.0e-31 139.0 210 46.2
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 5.7e-30 135.2 203 45.8
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 1.8e-28 130.2 200 42.0
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 1.9e-25 120.2 204 43.6
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 2.1e-24 116.7 163 44.8
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 1.4e-23 114.0 201 40.3
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 8.9e-23 111.3 136 44.9
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 7.5e-22 108.2 178 39.3
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 4.6e-19 99.0 101 54.5
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.3e-18 97.4 177 39.0
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 1.9e-17 93.6 125 44.8
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 3.6e-16 89.4 96 54.2
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 4.4e-14 82.4 179 38.0
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.9e-13 79.7 105 47.6
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.4e-12 76.6 105 46.7
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 1.0e-10 71.2 54 70.4
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.7e-10 70.5 130 36.2
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 6.6e-10 68.6 95 43.2
Eucgr.B00904 Eucalyptus grandis HOM05D006133 ORTHO05D007855 1.1e-09 67.8 144 38.2
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.9e-09 67.0 84 48.8
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 2.8e-08 63.2 63 60.3
TAR636G0634 Trochodendron aralioides HOM05D006133 ORTHO05D007855 2.8e-08 63.2 109 39.4
Eucgr.B00952 Eucalyptus grandis HOM05D006133 ORTHO05D007855 8.1e-08 61.6 98 41.8
Zm00001eb131680 Zea mays HOM05D006133 ORTHO05D446205 1.5e-06 57.4 65 44.6
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 1.5e-06 57.4 65 44.6
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 7.5e-06 55.1 69 47.8


User provided reference genes

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