Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 1.5e-64 249.2 114 100.0
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 3.6e-42 174.9 115 68.7
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 3.6e-42 174.9 115 69.6
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 8.1e-42 173.7 114 64.9
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 2.0e-40 169.1 114 64.0
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 4.4e-40 167.9 114 65.8
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 1.3e-39 166.4 114 64.9
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 6.4e-39 164.1 113 66.4
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 8.3e-39 163.7 114 64.0
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 1.1e-38 163.3 114 63.2
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 4.1e-38 161.4 114 62.3
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 5.4e-38 161.0 114 62.3
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 5.4e-38 161.0 114 66.7
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 9.2e-38 160.2 114 65.8
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 9.2e-38 160.2 118 61.0
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.6e-37 159.5 114 60.5
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 2.1e-37 159.1 114 62.3
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 2.7e-37 158.7 114 59.6
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 2.7e-37 158.7 119 58.8
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 4.6e-37 157.9 119 62.2
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 6.0e-37 157.5 113 61.1
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 7.8e-37 157.1 115 60.0
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.0e-36 156.8 107 62.6
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 1.0e-36 156.8 114 59.6
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 1.0e-36 156.8 117 59.8
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 1.3e-36 156.4 114 59.6
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 1.7e-36 156.0 114 61.4
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.7e-36 156.0 114 60.5
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 5.1e-36 154.5 113 61.9
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 5.1e-36 154.5 114 58.8
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 5.1e-36 154.5 114 61.4
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 8.6e-36 153.7 114 58.8
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.1e-35 153.3 114 58.8
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 1.5e-35 152.9 116 59.5
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.5e-35 152.9 114 58.8
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 1.9e-35 152.5 117 57.3
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 3.3e-35 151.8 115 60.0
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 4.3e-35 151.4 114 63.2
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 4.3e-35 151.4 115 58.3
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 5.6e-35 151.0 114 60.5
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 9.5e-35 150.2 114 62.3
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 1.6e-34 149.4 115 57.4
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 2.1e-34 149.1 122 59.8
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 2.8e-34 148.7 114 61.4
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 3.6e-34 148.3 114 59.6
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 3.6e-34 148.3 113 60.2
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 8.1e-34 147.1 114 57.0
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 8.1e-34 147.1 104 64.4
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 1.1e-33 146.7 114 57.0
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 1.4e-33 146.4 114 57.0
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 1.4e-33 146.4 114 57.0
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 1.8e-33 146.0 114 57.9
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 4.0e-33 144.8 114 56.1
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 4.0e-33 144.8 104 63.5
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 4.0e-33 144.8 114 56.1
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 4.0e-33 144.8 119 57.1
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 8.9e-33 143.7 114 57.0
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.2e-32 143.3 114 56.1
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 1.5e-32 142.9 114 57.0
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 2.0e-32 142.5 110 56.4
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 5.8e-32 141.0 115 53.0
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 9.9e-32 140.2 114 54.4
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 1.3e-31 139.8 114 56.1
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 1.3e-31 139.8 114 54.4
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 1.7e-31 139.4 115 53.0
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 4.9e-31 137.9 114 52.6
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 1.1e-30 136.7 105 56.2
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.1e-30 136.7 114 55.3
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 1.4e-30 136.3 115 49.6
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 2.4e-30 135.6 114 55.3
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 9.2e-30 133.7 114 54.4
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 1.2e-29 133.3 114 50.0
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 2.7e-29 132.1 114 53.5
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 7.8e-29 130.6 114 53.5
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 7.8e-29 130.6 114 53.5
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.0e-28 130.2 99 58.6
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 1.0e-28 130.2 114 51.8
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 2.3e-28 129.0 114 54.4
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 2.5e-27 125.6 114 48.2
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 2.5e-27 125.6 114 48.2
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 5.6e-27 124.4 113 46.9
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 9.6e-27 123.6 109 54.1
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 9.6e-27 123.6 115 53.9
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.2e-26 123.2 119 45.4
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 4.7e-26 121.3 101 52.5
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.4e-25 119.8 114 50.0
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.7e-23 112.8 108 49.1
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 1.3e-20 103.2 122 41.8
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 3.9e-20 101.7 73 60.3
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.5e-16 89.7 67 59.7
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.6e-16 89.0 84 47.6
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 7.1e-14 80.9 67 47.8
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 3.6e-10 68.6 114 35.1
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 7.6e-08 60.8 31 77.4
Nn1g02485 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.9e-07 58.9 50 58.0
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 5.5e-06 54.7 42 52.4


User provided reference genes

Program Settings