Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 2.2e-199 698.7 355 100.0
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 4.1e-100 369.0 346 54.9
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 2.6e-99 366.3 348 55.7
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 2.2e-98 363.2 352 55.4
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 1.1e-97 360.9 335 55.5
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 5.5e-97 358.6 351 54.4
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 7.9e-96 354.8 349 53.6
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 1.4e-95 354.0 353 54.1
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 1.8e-95 353.6 352 53.7
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 2.3e-95 353.2 347 53.0
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.1e-95 352.1 346 53.5
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.1e-95 352.1 346 53.5
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.1e-95 352.1 346 53.5
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.1e-95 352.1 346 53.5
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 2.6e-94 349.7 340 53.5
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 5.7e-94 348.6 339 53.4
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 5.7e-94 348.6 352 52.3
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 7.4e-94 348.2 327 56.0
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 1.3e-93 347.4 366 52.7
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 2.8e-93 346.3 339 54.0
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 2.8e-93 346.3 338 53.3
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 3.7e-93 345.9 340 54.1
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 4.8e-93 345.5 333 55.3
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 1.1e-92 344.4 347 52.4
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 1.8e-92 343.6 335 53.4
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 7.0e-92 341.7 333 52.9
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 1.2e-91 340.9 337 54.3
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 1.2e-91 340.9 348 52.9
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 1.2e-91 340.9 348 52.6
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 1.5e-91 340.5 349 50.4
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 2.0e-91 340.1 337 54.0
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 4.5e-91 339.0 337 54.0
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 5.9e-91 338.6 346 54.0
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 7.7e-91 338.2 333 52.0
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 1.3e-90 337.4 330 52.4
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 1.7e-90 337.0 348 50.6
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 1.7e-90 337.0 327 54.1
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 1.7e-90 337.0 327 54.1
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 2.2e-90 336.7 347 53.0
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 5.0e-90 335.5 353 52.1
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 1.1e-89 334.3 338 51.5
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 1.5e-89 334.0 351 52.1
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 2.5e-89 333.2 346 51.7
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 3.2e-89 332.8 370 48.1
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 4.2e-89 332.4 348 51.7
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 4.2e-89 332.4 333 54.4
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 9.4e-89 331.3 338 53.6
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 1.6e-88 330.5 352 50.3
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 2.1e-88 330.1 351 51.3
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 6.1e-88 328.6 340 51.5
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 1.0e-87 327.8 347 51.0
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 1.0e-87 327.8 351 51.3
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 1.0e-87 327.8 353 50.4
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 1.8e-87 327.0 341 53.4
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 2.3e-87 326.6 353 50.4
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 3.9e-87 325.9 336 51.5
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 8.8e-87 324.7 335 53.7
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 8.8e-87 324.7 350 50.9
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 2.6e-86 323.2 349 49.9
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 4.4e-86 322.4 328 52.4
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 7.4e-86 321.6 335 53.4
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 9.7e-86 321.2 331 52.3
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 9.7e-86 321.2 340 50.3
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 9.7e-86 321.2 340 50.6
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 1.3e-85 320.9 346 50.0
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 1.3e-85 320.9 337 51.3
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 1.7e-85 320.5 333 53.5
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 2.2e-85 320.1 340 49.7
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 3.7e-85 319.3 339 50.7
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 3.7e-85 319.3 355 49.6
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 3.7e-85 319.3 329 51.7
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 2.4e-84 316.6 347 50.1
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 4.1e-84 315.8 342 49.1
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 9.1e-84 314.7 334 50.9
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 2.6e-83 313.2 346 50.3
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 2.2e-82 310.1 350 50.0
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 3.8e-82 309.3 342 48.5
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 3.8e-82 309.3 336 50.3
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 5.0e-82 308.9 346 50.0
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 6.5e-82 308.5 362 47.8
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 6.5e-82 308.5 362 47.8
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 1.1e-81 307.8 337 51.0
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 3.2e-81 306.2 309 53.1
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 4.2e-81 305.8 338 47.6
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 9.4e-81 304.7 338 47.3
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 1.2e-80 304.3 365 46.6
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 1.6e-80 303.9 328 51.2
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 1.4e-79 300.8 329 49.8
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 3.0e-79 299.7 351 47.3
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 4.8e-77 292.4 266 56.0
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 7.7e-75 285.0 338 49.1
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 5.0e-74 282.3 266 54.1
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 4.2e-73 279.3 332 46.4
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 5.5e-73 278.9 353 44.5
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 1.0e-71 274.6 346 45.4
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 1.4e-71 274.2 330 47.9
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 6.8e-71 271.9 325 45.8
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 2.7e-67 260.0 305 46.6
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 2.9e-66 256.5 333 41.1
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 2.9e-66 256.5 343 42.6
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 3.3e-65 253.1 338 43.5
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 6.1e-64 248.8 338 39.3
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 7.5e-62 241.9 174 64.4
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 5.0e-58 229.2 204 55.9
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 1.5e-57 227.6 206 53.9
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.2e-56 224.6 375 36.3
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 7.5e-54 215.3 170 58.2
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 1.1e-49 201.4 319 39.2
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 5.6e-49 199.1 125 71.2
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 2.3e-42 177.2 344 34.0
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 1.9e-41 174.1 125 61.6
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 2.1e-40 170.6 254 42.1
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 8.1e-40 168.7 361 32.1
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 8.1e-40 168.7 349 31.2
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 1.9e-36 157.5 339 32.4
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 4.6e-35 152.9 331 35.0
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 3.9e-34 149.8 106 62.3
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 1.5e-33 147.9 337 30.3
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 9.6e-33 145.2 258 38.0
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 1.3e-29 134.8 331 32.3
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 1.9e-28 131.0 211 40.8
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 4.8e-24 116.3 86 61.6
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 2.0e-22 110.9 67 70.1
GSVIVG01004856001 Vitis vinifera HOM05D005879 ORTHO05D007432 4.4e-22 109.8 140 47.9
SEGI_41531 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 2.2e-21 107.5 166 41.6
BcaNung02300 Brassica carinata HOM05D005879 ORTHO05D007432 1.2e-19 101.7 150 40.7
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 1.6e-19 101.3 62 71.0
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.3e-16 91.7 90 53.3
A08p23210 Brassica napus HOM05D005879 ORTHO05D007432 4.5e-14 83.2 60 61.7
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 9.9e-14 82.0 147 27.9
Cfa025806 Carpinus fangiana HOM05D005879 ORTHO05D123935 3.0e-10 70.5 356 20.5
Pp3c4_21480 Physcomitrium patens HOM05D005879 ORTHO05D007432 9.0e-07 58.9 62 48.4
MCO14G569 Micromonas commoda HOM05D033910 ORTHO05D034414 5.8e-06 56.2 87 33.3


User provided reference genes

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