Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 3.7e-199 698.0 340 100.0
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 3.3e-51 206.5 222 46.4
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 1.7e-50 204.1 188 52.1
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 6.5e-47 192.2 179 48.0
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 2.5e-46 190.3 179 49.7
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 4.2e-46 189.5 180 50.6
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 7.2e-46 188.7 204 45.6
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 1.6e-45 187.6 180 50.6
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 1.6e-45 187.6 179 50.8
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 4.7e-45 186.0 179 48.6
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 4.7e-45 186.0 204 45.6
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 6.1e-45 185.7 177 49.2
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 8.0e-45 185.3 177 49.2
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 1.0e-44 184.9 177 50.3
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 1.4e-44 184.5 181 48.1
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 1.8e-44 184.1 179 49.7
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 2.3e-44 183.7 179 48.6
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 3.0e-44 183.3 199 43.7
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 5.2e-44 182.6 178 49.4
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 8.8e-44 181.8 178 48.3
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 1.2e-43 181.4 179 46.9
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.5e-43 181.0 178 48.9
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 2.0e-43 180.6 179 49.2
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 2.6e-43 180.3 203 44.3
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 3.4e-43 179.9 178 48.9
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 4.4e-43 179.5 178 48.9
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 5.7e-43 179.1 178 47.8
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 7.5e-43 178.7 177 50.3
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 7.5e-43 178.7 179 46.9
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 9.8e-43 178.3 179 48.0
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 9.8e-43 178.3 178 48.3
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 1.3e-42 177.9 177 50.3
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 1.3e-42 177.9 179 48.6
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 1.3e-42 177.9 173 49.1
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 2.8e-42 176.8 173 48.0
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 3.7e-42 176.4 175 48.0
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 3.7e-42 176.4 210 42.9
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 6.3e-42 175.6 179 46.9
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 1.1e-41 174.9 179 46.4
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 1.4e-41 174.5 179 46.4
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 1.4e-41 174.5 179 47.5
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.4e-41 174.5 178 47.2
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 1.4e-41 174.5 181 47.0
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 4.1e-41 172.9 178 46.1
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 7.0e-41 172.2 183 45.9
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 9.1e-41 171.8 177 45.8
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 1.6e-40 171.0 192 45.8
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 2.0e-40 170.6 183 44.8
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 2.7e-40 170.2 175 46.9
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 5.9e-40 169.1 175 44.0
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 1.0e-39 168.3 201 44.8
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 1.0e-39 168.3 179 44.1
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 1.0e-39 168.3 175 45.1
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 1.3e-39 167.9 160 47.5
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 1.7e-39 167.5 178 44.9
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 3.8e-39 166.4 177 46.3
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 5.0e-39 166.0 197 41.6
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 1.5e-38 164.5 164 48.2
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 2.5e-38 163.7 178 43.8
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 5.5e-38 162.5 178 42.1
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 9.4e-38 161.8 142 50.7
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 2.1e-37 160.6 180 42.8
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 6.1e-37 159.1 203 38.9
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 6.1e-37 159.1 203 38.9
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 6.1e-37 159.1 214 38.3
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 1.0e-36 158.3 178 43.8
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 1.0e-36 158.3 202 38.1
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 1.0e-36 158.3 202 38.1
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 1.0e-36 158.3 173 44.5
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 1.8e-36 157.5 174 44.8
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 1.8e-36 157.5 174 44.3
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 2.3e-36 157.1 203 38.4
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 1.2e-35 154.8 178 43.3
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 1.2e-35 154.8 176 42.6
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 2.0e-35 154.1 178 42.7
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 5.7e-35 152.5 209 37.8
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 7.5e-35 152.1 226 35.8
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 1.3e-34 151.4 173 43.9
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 1.7e-34 151.0 179 41.3
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 2.2e-34 150.6 179 42.5
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 2.8e-34 150.2 204 39.2
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 6.3e-34 149.1 172 41.9
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 5.4e-33 146.0 179 38.5
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 3.5e-32 143.3 226 34.5
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 4.5e-32 142.9 142 44.4
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 1.9e-30 137.5 140 45.7
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 1.9e-30 137.5 140 45.7
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 3.3e-30 136.7 146 47.3
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 6.1e-29 132.5 138 41.3
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 9.8e-27 125.2 174 39.7
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 3.7e-26 123.2 174 37.4
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 6.4e-26 122.5 180 37.8
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 8.3e-26 122.1 128 44.5
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 2.5e-22 110.5 85 54.1
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 1.6e-21 107.8 130 39.2
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 3.6e-21 106.7 160 35.0
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 4.4e-19 99.8 112 47.3
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 2.9e-18 97.1 83 50.6
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 6.4e-18 95.9 194 29.9
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 1.6e-16 91.3 181 34.3
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 1.0e-15 88.6 62 54.8
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 9.5e-14 82.0 93 41.9
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 9.5e-14 82.0 93 41.9
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 1.6e-13 81.3 181 32.6
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 8.9e-12 75.5 69 42.0
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 4.9e-10 69.7 215 28.8
SEGI_09568 Sequoiadendron giganteum HOM05D006254 ORTHO05D007409 3.5e-08 63.5 104 40.4
BolC4t22791H Brassica oleracea HOM05D006254 ORTHO05D007409 6.6e-07 59.3 54 42.6


User provided reference genes

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