Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.4e-137 493.0 258 100.0
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 2.8e-90 335.9 234 75.6
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 3.1e-89 332.4 196 84.7
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 5.2e-89 331.6 195 85.6
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 8.9e-89 330.9 204 82.8
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 9.9e-88 327.4 259 69.1
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 9.9e-88 327.4 201 81.1
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.3e-87 327.0 204 80.9
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 3.7e-87 325.5 203 82.3
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 3.7e-87 325.5 194 84.0
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 4.9e-87 325.1 190 86.8
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.1e-86 323.9 256 69.5
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.4e-86 322.8 195 82.6
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 2.4e-86 322.8 237 72.6
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 3.2e-86 322.4 196 83.7
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 4.1e-86 322.0 195 84.1
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 5.4e-86 321.6 232 72.8
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 5.4e-86 321.6 219 76.7
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 7.1e-86 321.2 193 83.9
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 7.1e-86 321.2 194 82.0
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 7.1e-86 321.2 194 84.0
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 9.2e-86 320.9 195 83.6
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 9.2e-86 320.9 241 72.2
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 9.2e-86 320.9 272 66.2
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 1.2e-85 320.5 196 81.6
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.2e-85 320.5 196 82.7
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.2e-85 320.5 234 72.2
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.1e-85 319.7 270 66.3
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.1e-85 319.7 232 72.8
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 2.1e-85 319.7 203 79.3
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 2.1e-85 319.7 261 70.9
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 3.5e-85 318.9 251 69.7
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 3.5e-85 318.9 188 84.0
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 7.8e-85 317.8 190 85.8
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.0e-84 317.4 250 69.6
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.0e-84 317.4 246 69.9
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.0e-84 317.4 270 65.9
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.0e-84 317.4 258 67.1
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.7e-84 316.6 195 82.1
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 3.0e-84 315.8 265 67.5
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 3.0e-84 315.8 189 83.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.9e-84 315.5 247 68.8
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.9e-84 315.5 189 83.6
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 3.9e-84 315.5 210 75.7
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 5.1e-84 315.1 205 77.6
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.1e-84 315.1 264 65.5
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 5.1e-84 315.1 264 65.5
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 5.1e-84 315.1 194 81.4
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 5.1e-84 315.1 204 77.9
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 5.1e-84 315.1 279 65.6
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 5.1e-84 315.1 261 65.9
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 6.6e-84 314.7 196 80.6
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 6.6e-84 314.7 197 81.2
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 8.6e-84 314.3 230 71.3
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 8.6e-84 314.3 210 76.2
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 8.6e-84 314.3 191 81.7
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.1e-83 313.9 196 80.1
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.1e-83 313.9 264 65.5
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.1e-83 313.9 194 80.4
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.5e-83 313.5 245 69.0
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.5e-83 312.8 230 73.0
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 2.5e-83 312.8 231 71.0
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.3e-83 312.4 189 82.5
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 7.3e-83 311.2 253 68.8
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 9.6e-83 310.8 228 71.1
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 9.6e-83 310.8 188 83.0
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 1.6e-82 310.1 231 71.9
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.6e-82 310.1 194 81.4
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.1e-82 309.7 265 66.0
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 6.2e-82 308.1 194 80.9
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.4e-81 307.0 279 64.5
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 2.4e-81 306.2 232 69.4
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 5.2e-81 305.1 192 82.8
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 6.8e-81 304.7 223 70.9
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 6.8e-81 304.7 227 70.9
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.5e-80 303.5 195 80.0
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 2.0e-80 303.1 188 80.3
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 3.4e-80 302.4 203 77.3
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 3.4e-80 302.4 187 82.4
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 4.4e-80 302.0 202 77.2
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 7.6e-80 301.2 203 74.9
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.7e-79 300.1 203 74.9
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 2.2e-79 299.7 229 69.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 2.2e-79 299.7 188 79.8
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.9e-79 299.3 188 79.8
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 2.9e-79 299.3 229 69.4
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 3.8e-79 298.9 195 76.4
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 3.8e-79 298.9 195 76.4
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 6.4e-79 298.1 187 79.7
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 8.4e-79 297.7 188 78.7
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 9.3e-78 294.3 188 79.3
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 9.3e-78 294.3 205 75.1
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 1.2e-77 293.9 188 79.8
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 3.5e-77 292.4 188 79.8
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 7.8e-77 291.2 203 73.4
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 1.0e-76 290.8 188 78.2
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.0e-76 290.8 188 78.7
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.5e-75 287.0 188 77.1
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.3e-71 273.9 207 66.2
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 8.4e-71 271.2 196 73.0
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 1.9e-70 270.0 189 69.8
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 2.4e-70 269.6 233 64.8
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 6.6e-68 261.5 189 74.1
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 3.1e-65 252.7 192 65.1
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.4e-62 243.8 207 59.4
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 1.3e-60 237.3 152 79.6
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.1e-54 217.6 161 72.7
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.9e-54 216.9 237 55.3
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 4.2e-54 215.7 185 64.9
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.6e-53 213.8 208 61.1
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.8e-49 200.3 200 51.5
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 6.5e-47 191.8 192 50.5
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 8.4e-47 191.4 110 85.5
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.9e-46 190.3 148 66.9
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.5e-45 186.0 212 51.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.1e-44 182.2 110 77.3
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 3.4e-40 169.5 188 47.3
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 9.7e-27 124.8 87 73.6
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.3e-26 124.4 138 55.8
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.0e-15 88.2 73 67.1
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 7.2e-14 82.0 50 80.0
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 4.7e-13 79.3 95 54.7
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 5.4e-09 65.9 44 70.5
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 4.5e-08 62.8 43 65.1
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.9e-07 60.1 67 55.2


User provided reference genes

Program Settings