Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G282 Amborella trichopoda HOM05D001188 ORTHO05D015292 9.7e-101 370.2 188 100.0
SEGI_25273 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 3.6e-23 112.5 197 37.1
MBI11_g43076_MAGBIO Magnolia biondii HOM05D001188 ORTHO05D015292 4.7e-23 112.1 191 37.7
Mapoly0047s0036 Marchantia polymorpha HOM05D001188 ORTHO05D001032 4.8e-15 85.5 168 35.7
PSO478G2914 Papaver somniferum HOM05D001188 ORTHO05D015292 8.1e-15 84.7 138 37.7
PSO017G4726 Papaver somniferum HOM05D001188 ORTHO05D015292 1.1e-14 84.3 138 39.1
Pp3c20_7460 Physcomitrium patens HOM05D001188 ORTHO05D001032 4.0e-14 82.4 136 39.0
Pp3c20_7510 Physcomitrium patens HOM05D001188 ORTHO05D001032 4.0e-14 82.4 136 39.0
CDE05G2322 Ceratophyllum demersum HOM05D001188 ORTHO05D015292 4.5e-13 79.0 160 30.0
Pp3c14_18120 Physcomitrium patens HOM05D001188 ORTHO05D001032 3.8e-12 75.9 170 33.5
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 6.4e-12 75.1 117 36.8
GSVIVG01032957001 Vitis vinifera HOM05D030760 ORTHO05D015292 5.4e-11 72.0 130 37.7
HPP92_020115 Vanilla planifolia HOM05D030760 ORTHO05D015292 2.1e-10 70.1 124 33.1
CDE02G0657 Ceratophyllum demersum HOM05D030760 ORTHO05D015292 2.7e-10 69.7 120 34.2
Cpa.g.sc3.511 Carica papaya HOM05D001188 ORTHO05D001032 3.5e-10 69.3 122 37.7
DCAR_026733 Daucus carota HOM05D001188 ORTHO05D001032 3.5e-10 69.3 135 32.6
Gohir.D04G138000 Gossypium hirsutum HOM05D001188 ORTHO05D001032 4.6e-10 68.9 130 30.8
Actinidia35089 Actinidia chinensis HOM05D001188 ORTHO05D001032 6.0e-10 68.6 142 31.7
Lj4g0018774 Lotus japonicus HOM05D001188 ORTHO05D001032 7.9e-10 68.2 130 30.0
Duzib084G1405 Durio zibethinus HOM05D001188 ORTHO05D001032 1.3e-09 67.4 131 31.3
Cpa.g.sc1.35 Carica papaya HOM05D001188 ORTHO05D001032 1.8e-09 67.0 146 31.5
Os05g0102500 Oryza sativa ssp. japonica HOM05D001188 ORTHO05D001032 1.8e-09 67.0 125 32.8
Gohir.A04G098400 Gossypium hirsutum HOM05D001188 ORTHO05D001032 2.3e-09 66.6 130 30.0
Gorai.012G122900 Gossypium raimondii HOM05D001188 ORTHO05D001032 2.3e-09 66.6 130 30.0
Hund28564 Selenicereus undatus HOM05D001188 ORTHO05D001032 3.0e-09 66.2 99 41.4
arahy.Tifrunner.gnm1.ann1.61ZXLU Arachis hypogaea HOM05D001188 ORTHO05D001032 8.7e-09 64.7 110 34.5
Glyma.08G365500 Glycine max HOM05D001188 ORTHO05D001032 1.5e-08 63.9 137 34.3
SalBow8G0834 Salvia bowleyana HOM05D001188 ORTHO05D001032 1.5e-08 63.9 128 31.2
Atru.chr9.860 Acer truncatum HOM05D001188 ORTHO05D001032 1.9e-08 63.5 131 34.4
Sabra17G0095000 Salix brachista HOM05D001188 ORTHO05D001032 1.9e-08 63.5 104 36.5
arahy.Tifrunner.gnm1.ann1.DW64SD Arachis hypogaea HOM05D001188 ORTHO05D001032 3.3e-08 62.8 110 33.6
Manes.01G011400 Manihot esculenta HOM05D001188 ORTHO05D001032 4.3e-08 62.4 131 32.8
Potri.010G124400 Populus trichocarpa HOM05D001188 ORTHO05D001032 4.3e-08 62.4 142 31.7
Prupe.5G221400 Prunus persica HOM05D001188 ORTHO05D001032 4.3e-08 62.4 131 36.6
Zm00001eb334130 Zea mays HOM05D001188 ORTHO05D001032 4.3e-08 62.4 117 33.3
COL.COLO4_24805 Corchorus olitorius HOM05D001188 ORTHO05D001032 5.6e-08 62.0 140 29.3
Manes.14G102800 Manihot esculenta HOM05D001188 ORTHO05D001032 5.6e-08 62.0 162 25.9
CDE07G1812 Ceratophyllum demersum HOM05D001188 ORTHO05D001032 7.4e-08 61.6 91 36.3
Lj9A426G57 Lonicera japonica HOM05D001188 ORTHO05D001032 7.4e-08 61.6 136 35.3
Sc10g0001180 Simmondsia chinensis HOM05D001188 ORTHO05D001032 7.4e-08 61.6 127 32.3
SGA_v2.0_scaffold36G14537 Striga asiatica HOM05D001188 ORTHO05D001032 7.4e-08 61.6 131 33.6
VMungo1383G2605 Vigna mungo HOM05D001188 ORTHO05D001032 7.4e-08 61.6 136 33.8
GSVIVG01008289001 Vitis vinifera HOM05D001188 ORTHO05D001032 7.4e-08 61.6 101 33.7
arahy.Tifrunner.gnm1.ann1.34XY90 Arachis hypogaea HOM05D001188 ORTHO05D001032 9.6e-08 61.2 138 33.3
arahy.Tifrunner.gnm1.ann1.4VI3XS Arachis hypogaea HOM05D001188 ORTHO05D001032 9.6e-08 61.2 138 33.3
Duzib205G0288 Durio zibethinus HOM05D001188 ORTHO05D001032 9.6e-08 61.2 153 31.4
Duzib268G1413 Durio zibethinus HOM05D001188 ORTHO05D001032 9.6e-08 61.2 140 30.0
SEGI_10257 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 9.6e-08 61.2 118 31.4
vmacro10559 Vaccinium macrocarpon HOM05D001188 ORTHO05D001032 9.6e-08 61.2 139 30.9
CiPaw.15G130700 Carya illinoinensis HOM05D001188 ORTHO05D001032 1.3e-07 60.8 135 33.3
Prupe.3G157300 Prunus persica HOM05D001188 ORTHO05D001032 1.3e-07 60.8 95 37.9
QL01p042313 Quercus lobata HOM05D001188 ORTHO05D001032 1.3e-07 60.8 137 29.9
unitig_10.g29676 Utricularia gibba HOM05D001188 ORTHO05D001032 1.3e-07 60.8 118 34.7
unitig_8.g3981 Utricularia gibba HOM05D001188 ORTHO05D001032 1.3e-07 60.8 118 34.7
VMungo0251G0814 Vigna mungo HOM05D001259 ORTHO05D001103 1.3e-07 60.8 144 31.2
Ca_13733_v3 Cicer arietinum L. HOM05D001188 ORTHO05D001032 1.6e-07 60.5 130 33.8
Dinv31636 Davidia involucrata HOM05D001188 ORTHO05D001032 1.6e-07 60.5 139 30.2
Lalb_Chr21g0317821 Lupinus albus HOM05D001188 ORTHO05D001032 1.6e-07 60.5 129 31.8
Aqoxy3G00294 Aquilegia oxysepala HOM05D001188 ORTHO05D001032 2.1e-07 60.1 133 30.8
Potri.017G114700 Populus trichocarpa HOM05D001188 ORTHO05D001032 2.1e-07 60.1 101 36.6
Rhsim12G0085100 Rhododendron simsii HOM05D001188 ORTHO05D001032 2.1e-07 60.1 141 31.2
RcHm_v2.0_Chr4g0435131 Rosa chinensis HOM05D001188 ORTHO05D001032 2.1e-07 60.1 134 34.3
SMO145G0018 Selaginella moellendorffii HOM05D001188 ORTHO05D001032 2.1e-07 60.1 183 28.4
Ca_25447_v3 Cicer arietinum L. HOM05D001188 ORTHO05D001032 2.8e-07 59.7 130 33.1
Ciclev10022616m.g Citrus clementina HOM05D001188 ORTHO05D001032 2.8e-07 59.7 146 32.9
FAN07G0717 Fragaria x ananassa HOM05D001188 ORTHO05D001032 2.8e-07 59.7 132 33.3
Nn4g23850 Nelumbo nucifera HOM05D001188 ORTHO05D001032 2.8e-07 59.7 151 30.5
PGR119G2082 Punica granatum HOM05D001188 ORTHO05D001032 2.8e-07 59.7 144 29.9
THA.LOC104821931 Tarenaya hassleriana HOM05D001188 ORTHO05D001032 2.8e-07 59.7 121 33.1
TPR.G18798 Trifolium pratense HOM05D001188 ORTHO05D001032 2.8e-07 59.7 140 32.9
TWI74G0376 Tripterygium wilfordii HOM05D001188 ORTHO05D001032 2.8e-07 59.7 139 32.4
unitig_22.g5573 Utricularia gibba HOM05D001188 ORTHO05D001032 2.8e-07 59.7 117 36.8
Eucgr.G02318 Eucalyptus grandis HOM05D001188 ORTHO05D001032 3.7e-07 59.3 157 29.9
MD14G1226700 Malus domestica HOM05D001188 ORTHO05D001032 3.7e-07 59.3 101 34.7
PSO017G0291 Papaver somniferum HOM05D001188 ORTHO05D001032 3.7e-07 59.3 106 31.1
PGR044G0229 Punica granatum HOM05D001188 ORTHO05D001032 3.7e-07 59.3 149 30.2
Thecc.03G035200 Theobroma cacao HOM05D001188 ORTHO05D001032 3.7e-07 59.3 101 34.7
TWI15G1206 Tripterygium wilfordii HOM05D001188 ORTHO05D001032 3.7e-07 59.3 127 31.5
DCAR_030157 Daucus carota HOM05D001188 ORTHO05D001032 4.8e-07 58.9 136 29.4
Glyma.13G046100 Glycine max HOM05D001188 ORTHO05D001032 4.8e-07 58.9 133 31.6
Gorai.005G190600 Gossypium raimondii HOM05D001188 ORTHO05D001032 4.8e-07 58.9 134 30.6
Nitab4.5_0000791g0120 Nicotiana tabacum HOM05D001188 ORTHO05D001032 4.8e-07 58.9 142 28.9
GSVIVG01031028001 Vitis vinifera HOM05D001188 ORTHO05D001032 4.8e-07 58.9 97 36.1
CDE06G1178 Ceratophyllum demersum HOM05D001188 ORTHO05D001032 6.2e-07 58.5 88 38.6
Eucgr.K02224 Eucalyptus grandis HOM05D001188 ORTHO05D001032 6.2e-07 58.5 97 37.1
Glyma.08G041300 Glycine max HOM05D001188 ORTHO05D001032 6.2e-07 58.5 145 31.0
HanXRQChr08g0213871 Helianthus annuus HOM05D001188 ORTHO05D001032 6.2e-07 58.5 136 35.3
Lj3C1014T9 Lonicera japonica HOM05D001188 ORTHO05D001032 6.2e-07 58.5 136 30.9
Lalb_Chr04g0257451 Lupinus albus HOM05D001188 ORTHO05D001032 6.2e-07 58.5 126 30.2
Nitab4.5_0003373g0040 Nicotiana tabacum HOM05D001188 ORTHO05D001032 6.2e-07 58.5 143 28.0
PSO478G0398 Papaver somniferum HOM05D001188 ORTHO05D001032 6.2e-07 58.5 106 30.2
Peaxi162Scf00382g00824 Petunia axillaris HOM05D001188 ORTHO05D001032 6.2e-07 58.5 137 30.7
Psat1g080520 Pisum sativum HOM05D001188 ORTHO05D001032 6.2e-07 58.5 129 36.4
Hund20797 Selenicereus undatus HOM05D001188 ORTHO05D001032 6.2e-07 58.5 91 35.2
TAR629G0241 Trochodendron aralioides HOM05D001188 ORTHO05D001032 6.2e-07 58.5 133 30.1
unitig_22.g6556 Utricularia gibba HOM05D001188 ORTHO05D001032 6.2e-07 58.5 121 33.9
CSS0009416 Camellia sinensis var. sinensis HOM05D001188 ORTHO05D001032 8.1e-07 58.2 137 32.1
Ciclev10012908m.g Citrus clementina HOM05D001188 ORTHO05D001032 8.1e-07 58.2 106 33.0
Haze_17488 Corylus avellana HOM05D001188 ORTHO05D001032 8.1e-07 58.2 144 30.6
Gohir.D06G049000 Gossypium hirsutum HOM05D001188 ORTHO05D001032 8.1e-07 58.2 91 35.2
Gorai.010G055500 Gossypium raimondii HOM05D001188 ORTHO05D001032 8.1e-07 58.2 91 35.2
Lalb_Chr24g0397791 Lupinus albus HOM05D001188 ORTHO05D001032 8.1e-07 58.2 109 35.8
Phvul.008G005800 Phaseolus vulgaris HOM05D001188 ORTHO05D001032 8.1e-07 58.2 108 33.3
Potri.015G047100 Populus trichocarpa HOM05D001188 ORTHO05D001032 8.1e-07 58.2 94 31.9
QL10p025341 Quercus lobata HOM05D001188 ORTHO05D001032 8.1e-07 58.2 114 30.7
CANSAT80G0425 Cannabis sativa HOM05D001188 ORTHO05D001032 1.1e-06 57.8 98 34.7
Lj2g0018195 Lotus japonicus HOM05D001188 ORTHO05D001032 1.1e-06 57.8 97 33.0
Lalb_Chr14g0371161 Lupinus albus HOM05D001188 ORTHO05D001032 1.1e-06 57.8 94 34.0
Manes.02G068500 Manihot esculenta HOM05D001188 ORTHO05D001032 1.1e-06 57.8 93 35.5
CANSAT80G0467 Cannabis sativa HOM05D001188 ORTHO05D001032 1.4e-06 57.4 86 37.2
Sc04g0006400 Simmondsia chinensis HOM05D001188 ORTHO05D001032 1.4e-06 57.4 136 29.4
TPR.G32676 Trifolium pratense HOM05D001188 ORTHO05D001032 1.4e-06 57.4 138 30.4
Zm00001eb267620 Zea mays HOM05D001188 ORTHO05D015292 1.4e-06 57.4 79 38.0
ECA233G5311 Erigeron canadensis HOM05D001188 ORTHO05D001032 1.8e-06 57.0 140 28.6
Medtr1g110760 Medicago truncatula HOM05D001188 ORTHO05D001032 1.8e-06 57.0 142 31.0
RcHm_v2.0_Chr7g0185461 Rosa chinensis HOM05D001188 ORTHO05D001032 1.8e-06 57.0 89 34.8
TPR.G32492 Trifolium pratense HOM05D001188 ORTHO05D001032 1.8e-06 57.0 92 34.8
arahy.Tifrunner.gnm1.ann1.Z3Y2S3 Arachis hypogaea HOM05D001188 ORTHO05D001032 2.4e-06 56.6 102 35.3
CSS0010207 Camellia sinensis var. sinensis HOM05D001188 ORTHO05D001032 2.4e-06 56.6 135 31.1
ClCG05G011830 Citrullus lanatus HOM05D001188 ORTHO05D001032 2.4e-06 56.6 135 28.9
Duzib248G1403 Durio zibethinus HOM05D001188 ORTHO05D001032 2.4e-06 56.6 145 29.0
Hma1.2p1_0061F.1_g033860 Hydrangea macrophylla HOM05D001188 ORTHO05D001032 2.4e-06 56.6 138 30.4
Lalb_Chr02g0158221 Lupinus albus HOM05D001188 ORTHO05D001032 2.4e-06 56.6 133 32.3
Lalb_Chr17g0335871 Lupinus albus HOM05D001188 ORTHO05D001032 2.4e-06 56.6 124 30.6
BcaC08g45969 Brassica carinata HOM05D001188 ORTHO05D001032 3.1e-06 56.2 135 28.1
C06p37590 Brassica napus HOM05D001188 ORTHO05D001032 3.1e-06 56.2 135 28.1
BolC6t38862H Brassica oleracea HOM05D001188 ORTHO05D001032 3.1e-06 56.2 135 28.1
Carub.0001s1310 Capsella rubella HOM05D001188 ORTHO05D001032 3.1e-06 56.2 91 33.0
CAN.G610.80 Capsicum annuum HOM05D001188 ORTHO05D001032 3.1e-06 56.2 134 29.1
Potri.008G121000 Populus trichocarpa HOM05D001188 ORTHO05D001032 3.1e-06 56.2 139 27.3
Duzib251G0580 Durio zibethinus HOM05D001188 ORTHO05D001032 4.0e-06 55.8 140 26.4
Gohir.D02G170100 Gossypium hirsutum HOM05D001188 ORTHO05D001032 4.0e-06 55.8 134 29.9
MD06G1216300 Malus domestica HOM05D001188 ORTHO05D001032 4.0e-06 55.8 92 35.9
Sed0026905 Sechium edule HOM05D001188 ORTHO05D001032 4.0e-06 55.8 93 35.5
TAR622G0754 Trochodendron aralioides HOM05D001188 ORTHO05D001032 4.0e-06 55.8 125 29.6
Ah.03g137620 Amaranthus hybridus HOM05D001188 ORTHO05D001032 5.3e-06 55.5 122 35.2
CSS0008362 Camellia sinensis var. sinensis HOM05D001188 ORTHO05D001032 5.3e-06 55.5 133 30.1
CsaV3_1G003820 Cucumis sativus L. HOM05D001188 ORTHO05D001032 5.3e-06 55.5 135 31.1
Gohir.A12G054100 Gossypium hirsutum HOM05D001188 ORTHO05D001032 5.3e-06 55.5 135 31.9
HanXRQChr15g0476301 Helianthus annuus HOM05D001188 ORTHO05D001032 5.3e-06 55.5 157 28.7
Hma1.2p1_0653F.1_g196290 Hydrangea macrophylla HOM05D001188 ORTHO05D001032 5.3e-06 55.5 131 35.9
Lalb_Chr22g0353071 Lupinus albus HOM05D001188 ORTHO05D001032 5.3e-06 55.5 91 33.0
Phvul.002G316300 Phaseolus vulgaris HOM05D001188 ORTHO05D001032 5.3e-06 55.5 130 30.8
Sed0009614 Sechium edule HOM05D001188 ORTHO05D001032 5.3e-06 55.5 129 34.1
TAR374G1010 Trochodendron aralioides HOM05D001188 ORTHO05D001032 5.3e-06 55.5 162 27.2
VMungo0720G1100 Vigna mungo HOM05D001188 ORTHO05D001032 5.3e-06 55.5 147 31.3
arahy.Tifrunner.gnm1.ann1.LU8TWQ Arachis hypogaea HOM05D001188 ORTHO05D001032 6.9e-06 55.1 102 34.3
Cfa018592 Carpinus fangiana HOM05D001188 ORTHO05D001032 6.9e-06 55.1 144 29.9
Gohir.A03G147000 Gossypium hirsutum HOM05D001188 ORTHO05D001032 6.9e-06 55.1 137 27.7
Lj6A758T16 Lonicera japonica HOM05D001188 ORTHO05D001032 6.9e-06 55.1 137 30.7
MD16G1042400 Malus domestica HOM05D001188 ORTHO05D001032 6.9e-06 55.1 141 30.5
MSTRG.13534 Avicennia marina HOM05D001188 ORTHO05D001032 9.0e-06 54.7 92 38.0
AUR62035213 Chenopodium quinoa HOM05D001188 ORTHO05D001032 9.0e-06 54.7 92 33.7
ClCG06G014810 Citrullus lanatus HOM05D001188 ORTHO05D001032 9.0e-06 54.7 91 37.4
MELO3C023804.2 Cucumis melo HOM05D001188 ORTHO05D001032 9.0e-06 54.7 135 28.1


User provided reference genes

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