Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.1e-192 676.4 332 100.0
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.1e-127 459.5 340 67.1
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.6e-125 452.6 336 67.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.4e-123 446.0 344 65.1
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 3.5e-122 442.2 342 65.2
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 4.6e-122 441.8 348 64.4
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 7.9e-122 441.0 343 65.6
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 1.9e-120 436.4 341 64.5
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 1.9e-120 436.4 358 62.8
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.5e-120 436.0 339 65.2
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 3.3e-120 435.6 333 64.0
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 5.6e-120 434.9 345 63.2
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 5.6e-120 434.9 342 64.0
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 9.6e-120 434.1 342 64.9
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 2.1e-119 433.0 344 64.2
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 2.1e-119 433.0 347 65.1
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 2.8e-119 432.6 357 61.9
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 2.8e-119 432.6 360 61.9
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.7e-119 432.2 342 63.7
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 6.2e-119 431.4 337 65.0
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 1.1e-118 430.6 347 64.6
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.1e-118 430.6 343 64.1
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 4.0e-118 428.7 356 62.1
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.0e-118 428.7 343 63.3
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.0e-118 428.7 344 64.2
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 4.0e-118 428.7 351 63.0
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 4.0e-118 428.7 352 63.4
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 4.0e-118 428.7 335 63.6
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 4.0e-118 428.7 344 63.7
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 4.0e-118 428.7 343 63.3
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 6.9e-118 427.9 340 63.5
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 9.0e-118 427.6 345 63.8
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.2e-117 427.2 340 63.5
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 2.6e-117 426.0 351 61.0
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 3.4e-117 425.6 351 61.3
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.4e-117 425.6 351 61.3
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 3.4e-117 425.6 369 60.7
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 3.8e-116 422.2 348 61.8
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 4.9e-116 421.8 357 62.7
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 8.4e-116 421.0 352 61.1
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 8.4e-116 421.0 355 63.4
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.1e-115 420.6 352 60.2
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.4e-115 420.2 357 61.6
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 1.4e-115 420.2 344 62.8
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.4e-115 420.2 344 62.8
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 1.9e-115 419.9 353 58.9
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 2.5e-115 419.5 355 60.3
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.2e-115 419.1 360 61.4
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.2e-115 419.1 360 61.4
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 3.2e-115 419.1 342 62.0
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 3.2e-115 419.1 350 61.4
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 4.2e-115 418.7 357 60.2
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 5.5e-115 418.3 360 60.8
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 7.1e-115 417.9 344 62.5
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 1.2e-114 417.2 347 59.9
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 1.6e-114 416.8 359 61.3
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.6e-114 416.8 348 61.5
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.1e-114 416.4 291 70.8
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 2.7e-114 416.0 359 61.3
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 2.7e-114 416.0 341 61.9
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 3.5e-114 415.6 345 63.2
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 6.0e-114 414.8 335 60.9
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 1.0e-113 414.1 354 61.3
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 1.3e-113 413.7 336 62.5
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.8e-113 413.3 355 58.3
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 2.3e-113 412.9 355 58.3
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 2.3e-113 412.9 358 58.9
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 2.3e-113 412.9 358 58.1
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 3.0e-113 412.5 343 62.4
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 3.9e-113 412.1 355 58.0
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 3.9e-113 412.1 356 58.1
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.9e-113 412.1 348 61.8
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 5.1e-113 411.8 348 60.1
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 5.1e-113 411.8 356 58.1
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 6.7e-113 411.4 348 59.2
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 6.7e-113 411.4 335 60.9
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 8.7e-113 411.0 342 62.6
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 1.5e-112 410.2 356 57.3
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 1.5e-112 410.2 356 57.3
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.5e-112 410.2 354 61.3
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 1.5e-112 410.2 339 60.5
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 1.5e-112 410.2 351 58.7
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.9e-112 409.8 350 59.1
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 5.7e-112 408.3 355 57.5
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 5.7e-112 408.3 368 59.2
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 1.6e-111 406.8 362 59.4
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 2.8e-111 406.0 343 59.8
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 4.8e-111 405.2 350 60.9
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 4.8e-111 405.2 355 59.2
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 1.4e-110 403.7 374 58.6
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 1.4e-110 403.7 374 58.6
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 3.1e-110 402.5 305 65.2
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 6.9e-110 401.4 362 59.7
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 1.0e-108 397.5 362 59.1
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.3e-108 397.1 344 60.8
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 2.9e-108 396.0 309 61.5
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 3.8e-108 395.6 351 58.7
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 3.8e-108 395.6 432 51.4
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 2.5e-107 392.9 337 59.6
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 7.9e-106 387.9 301 60.5
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 4.8e-103 378.6 354 56.8
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 1.1e-102 377.5 357 54.9
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 5.9e-101 371.7 351 54.4
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.3e-100 370.5 324 59.3
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.1e-99 367.5 302 57.0
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 5.5e-99 365.2 336 56.2
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 1.6e-98 363.6 313 61.0
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 3.0e-97 359.4 311 60.5
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 8.8e-97 357.8 331 57.7
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 5.7e-96 355.1 325 57.8
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 2.8e-95 352.8 321 57.6
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.4e-94 349.7 339 55.5
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 5.3e-94 348.6 336 52.4
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 3.4e-93 345.9 309 56.6
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.5e-91 339.7 341 53.7
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 7.2e-91 338.2 347 50.4
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 5.2e-89 332.0 226 70.8
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 4.4e-88 328.9 291 51.5
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 8.2e-87 324.7 194 77.3
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 3.5e-85 319.3 194 76.3
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 1.0e-84 317.8 194 74.2
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 3.0e-81 306.2 278 59.0
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 5.2e-81 305.4 345 49.3
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 2.0e-80 303.5 282 60.6
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.1e-78 297.7 280 58.6
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 2.2e-63 246.9 153 76.5
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 2.4e-54 216.9 200 57.0
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.2e-54 216.5 126 79.4
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 4.3e-43 179.5 100 81.0
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.9e-38 164.1 197 45.2
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.4e-38 163.7 89 79.8
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 3.3e-35 153.3 170 51.8
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 2.5e-27 127.1 102 66.7
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 2.8e-26 123.6 88 67.0
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.8e-25 120.9 127 52.8
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 6.9e-25 119.0 73 68.5
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 1.2e-24 118.2 73 69.9
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.6e-21 107.8 127 46.5
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.7e-21 107.1 147 45.6
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 8.4e-15 85.5 225 33.8
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 7.4e-11 72.4 41 78.0
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 3.1e-09 67.0 109 40.4


User provided reference genes

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