Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 3.0e-140 501.9 264 100.0
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 8.8e-84 314.3 250 61.6
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 2.0e-83 313.2 263 62.4
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 1.3e-82 310.5 234 67.5
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.9e-82 308.5 257 59.9
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 4.9e-82 308.5 232 67.7
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 4.9e-82 308.5 258 61.2
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 6.3e-82 308.1 258 61.6
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 1.1e-81 307.4 250 60.0
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 1.4e-81 307.0 232 67.2
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 1.8e-81 306.6 239 61.5
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.8e-81 306.6 257 59.9
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 2.4e-81 306.2 230 66.5
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 3.1e-81 305.8 257 60.3
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.1e-81 305.4 258 60.9
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 4.1e-81 305.4 232 65.5
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 5.4e-81 305.1 230 66.1
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 5.4e-81 305.1 251 62.9
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 5.4e-81 305.1 233 66.5
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 1.6e-80 303.5 237 64.6
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 1.6e-80 303.5 251 61.4
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 4.5e-80 302.0 240 61.7
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 1.0e-79 300.8 253 62.8
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 1.3e-79 300.4 251 60.2
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 1.3e-79 300.4 224 68.3
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 2.3e-79 299.7 255 61.2
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 2.3e-79 299.7 243 63.0
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 8.6e-79 297.7 251 60.2
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 8.6e-79 297.7 243 61.7
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 8.6e-79 297.7 233 66.5
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 8.6e-79 297.7 256 62.5
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 1.9e-78 296.6 243 61.3
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 3.3e-78 295.8 258 60.9
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 3.3e-78 295.8 246 60.6
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 4.3e-78 295.4 234 64.5
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 5.6e-78 295.0 247 62.3
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 5.6e-78 295.0 225 63.6
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 5.6e-78 295.0 234 64.1
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 9.5e-78 294.3 238 62.6
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 1.2e-77 293.9 243 63.8
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 2.8e-77 292.7 227 63.0
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 2.8e-77 292.7 227 63.9
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 4.7e-77 292.0 252 58.7
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 8.0e-77 291.2 234 63.7
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 1.4e-76 290.4 241 62.2
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.8e-76 290.0 244 60.2
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 6.8e-76 288.1 228 61.8
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 6.8e-76 288.1 257 59.9
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 8.9e-76 287.7 236 63.1
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 1.2e-75 287.3 232 64.2
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 1.2e-75 287.3 249 59.8
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.5e-75 287.0 228 61.0
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 2.0e-75 286.6 245 58.8
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 1.7e-74 283.5 254 55.1
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 2.2e-74 283.1 251 58.6
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 2.9e-74 282.7 233 61.8
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 6.4e-74 281.6 197 69.0
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 3.2e-73 279.3 236 58.5
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 3.2e-73 279.3 247 59.9
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 3.2e-73 279.3 253 56.9
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 3.2e-73 279.3 232 61.2
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 3.2e-73 279.3 205 64.9
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 4.1e-73 278.9 227 61.2
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 5.4e-73 278.5 247 59.9
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 7.0e-73 278.1 222 59.9
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 7.0e-73 278.1 247 57.9
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 2.7e-72 276.2 205 63.9
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 2.7e-72 276.2 205 65.4
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 2.7e-72 276.2 205 65.4
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 3.5e-72 275.8 254 55.5
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 4.6e-72 275.4 229 59.8
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 4.6e-72 275.4 249 55.0
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 5.9e-72 275.0 228 59.2
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 5.9e-72 275.0 228 59.2
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 7.8e-72 274.6 227 60.8
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 1.0e-71 274.2 223 61.4
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 2.3e-71 273.1 210 63.3
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 2.3e-71 273.1 228 61.8
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 3.0e-71 272.7 242 56.2
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 3.0e-71 272.7 202 66.8
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 1.1e-70 270.8 233 59.7
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 1.5e-70 270.4 252 54.4
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 5.6e-70 268.5 254 52.8
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 1.2e-69 267.3 232 59.1
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 6.2e-69 265.0 258 51.9
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 8.0e-69 264.6 258 51.9
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 1.8e-68 263.5 228 57.5
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 1.8e-68 263.5 223 59.2
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 2.3e-68 263.1 228 57.5
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 3.1e-68 262.7 228 57.9
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 5.2e-68 261.9 246 53.7
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 5.2e-68 261.9 233 56.7
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 1.7e-66 256.9 187 65.8
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 5.4e-65 251.9 244 54.1
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 4.6e-64 248.8 220 58.6
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 4.3e-62 242.3 236 54.7
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 4.0e-60 235.7 202 57.9
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 5.8e-59 231.9 229 52.0
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 2.9e-58 229.6 212 53.8
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 1.4e-57 227.3 398 37.2
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 3.0e-55 219.5 200 60.0
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 1.6e-53 213.8 230 51.3
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 1.3e-42 177.6 135 65.9
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 3.8e-42 176.0 244 40.2
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 3.6e-37 159.5 139 56.1
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 6.2e-37 158.7 127 57.5
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.3e-34 151.0 98 73.5
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 4.2e-33 146.0 111 65.8
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 5.8e-19 99.0 189 37.6
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 2.1e-16 90.5 86 57.0


User provided reference genes

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