Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.4e-212 742.7 358 100.0
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 7.4e-150 534.3 356 71.1
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 1.1e-148 530.4 353 70.8
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 7.6e-147 524.2 362 68.5
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.5e-145 519.2 356 67.4
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.3e-143 513.5 352 67.9
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.9e-142 509.6 354 65.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 3.3e-142 508.8 352 66.2
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 9.7e-142 507.3 352 66.8
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 3.7e-141 505.4 352 65.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 6.3e-141 504.6 352 65.6
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 5.0e-138 495.0 352 63.1
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.1e-137 493.8 352 64.2
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.4e-137 493.4 351 64.1
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.5e-137 492.7 352 65.6
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.5e-137 492.7 353 63.7
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.6e-136 490.0 355 63.4
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 4.6e-136 488.4 352 63.4
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.0e-135 487.3 351 63.2
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.0e-135 485.7 385 61.3
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 5.1e-135 485.0 351 63.0
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.5e-134 483.4 351 60.1
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.5e-134 483.4 352 64.2
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 1.9e-134 483.0 352 63.1
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.3e-134 482.3 352 65.1
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 7.4e-134 481.1 353 63.2
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 9.7e-134 480.7 358 64.5
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.7e-133 479.9 352 63.9
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.8e-133 479.2 353 62.9
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 6.3e-133 478.0 351 62.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 8.2e-133 477.6 350 63.1
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.4e-132 476.9 352 63.4
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.8e-132 476.5 351 62.1
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 2.4e-132 476.1 353 62.3
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 5.3e-132 474.9 352 60.8
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 3.4e-131 472.2 352 62.5
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.9e-130 469.2 331 65.3
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 5.0e-130 468.4 352 61.6
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 5.0e-130 468.4 353 64.3
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.5e-129 466.1 416 54.3
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 3.2e-129 465.7 416 54.3
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 4.2e-129 465.3 354 61.6
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 9.4e-129 464.2 352 60.2
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.2e-128 463.8 358 59.8
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 2.7e-128 462.6 358 59.8
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.8e-127 459.9 354 61.0
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 2.3e-127 459.5 352 59.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 8.8e-127 457.6 322 64.3
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.1e-126 457.2 352 60.2
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 2.0e-126 456.4 353 59.8
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.6e-126 456.1 357 60.8
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 4.4e-126 455.3 451 51.2
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 8.2e-125 451.1 352 58.8
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.4e-124 450.3 367 59.1
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.4e-121 440.3 357 58.3
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 3.2e-121 439.1 358 57.8
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 6.3e-117 424.9 352 58.0
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.3e-117 424.9 352 58.0
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.1e-116 422.5 352 57.7
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 6.5e-114 414.8 351 57.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 4.4e-110 402.1 499 44.7
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.4e-108 397.1 356 56.7
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.0e-106 391.0 457 46.4
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 4.4e-102 375.6 287 62.4
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 8.3e-93 344.7 363 47.1
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.5e-89 334.0 292 56.8
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.6e-80 302.8 194 71.6
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.0e-78 297.0 232 60.3
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.7e-77 292.7 359 41.5
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 8.6e-74 281.6 344 45.9
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.1e-72 276.9 198 61.1
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 5.1e-66 255.8 216 55.6
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 6.2e-64 248.8 233 51.5
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 5.8e-62 242.3 147 73.5
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.2e-59 234.6 161 64.6
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 9.3e-52 208.4 247 46.2
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 5.1e-50 202.6 141 65.2
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 8.1e-48 195.3 358 32.1
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.9e-41 174.1 159 52.8
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 9.6e-41 171.8 424 30.0
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.3e-37 161.4 319 31.7
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.6e-35 154.5 106 67.0
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.4e-31 141.4 103 70.9
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 4.0e-31 139.8 128 53.1
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.0e-31 139.8 107 60.7
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.2e-30 138.3 113 57.5
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.4e-29 132.1 114 63.2
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.6e-27 127.9 70 75.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 3.0e-26 123.6 70 72.9
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 3.0e-26 123.6 70 72.9
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.1e-25 121.7 134 48.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.6e-24 117.9 69 72.5
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.4e-20 104.8 294 27.6
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.7e-19 100.5 76 64.5
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.9e-18 96.7 65 69.2
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.9e-18 96.7 65 69.2
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.1e-18 96.3 65 67.7
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.5e-17 94.7 65 67.7
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 7.4e-17 92.4 61 60.7
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 9.7e-17 92.0 86 47.7
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.0e-14 84.3 49 67.3
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.6e-14 84.0 55 65.5
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.6e-14 84.0 49 69.4
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.5e-12 77.4 90 47.8
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 4.1e-07 60.1 58 53.4


User provided reference genes

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