Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.7e-271 938.7 468 100.0
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 5.2e-220 767.7 463 78.8
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.0e-215 753.4 471 76.9
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.7e-215 752.7 463 78.2
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 5.2e-212 741.1 463 76.5
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.3e-210 736.5 464 75.2
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 2.8e-210 735.3 467 75.8
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 6.3e-210 734.2 461 75.3
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.8e-209 732.6 463 74.7
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.6e-208 729.6 463 74.7
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.0e-208 729.2 461 76.1
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 2.7e-208 728.8 462 74.9
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 4.5e-208 728.0 470 74.5
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 7.8e-208 727.2 462 74.7
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.0e-207 726.9 463 74.5
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 2.3e-207 725.7 462 74.9
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 8.6e-207 723.8 464 74.6
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 1.9e-206 722.6 459 73.0
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 3.3e-206 721.8 463 73.9
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 3.3e-206 721.8 463 74.5
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 5.6e-206 721.1 461 74.0
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 5.6e-206 721.1 461 73.8
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 9.5e-206 720.3 461 74.6
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.8e-205 718.8 466 73.2
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 3.6e-205 718.4 460 73.7
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 3.6e-205 718.4 467 72.4
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 4.7e-205 718.0 487 72.1
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 6.1e-205 717.6 467 73.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.0e-205 717.2 461 74.2
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 1.4e-204 716.5 462 73.6
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.8e-204 716.1 467 71.7
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.2e-203 713.4 493 70.0
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 3.4e-203 711.8 463 72.6
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 4.4e-203 711.4 460 73.3
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 7.5e-203 710.7 493 70.0
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.2e-202 709.1 467 71.5
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.9e-202 708.8 461 72.5
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.7e-202 708.4 493 69.8
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 6.4e-202 707.6 463 71.7
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 3.2e-201 705.3 463 71.9
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.2e-200 703.4 467 70.7
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.0e-199 700.3 467 71.3
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.0e-199 700.3 496 69.0
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.7e-199 699.5 464 72.6
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.1e-198 696.8 465 71.2
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.1e-198 696.8 501 67.5
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 3.3e-198 695.3 462 71.4
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 7.3e-198 694.1 463 70.6
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.4e-196 689.9 463 70.2
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 2.3e-196 689.1 461 71.1
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 4.0e-196 688.3 497 67.2
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 9.2e-193 677.2 536 62.3
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 9.2e-193 677.2 466 70.2
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 6.6e-191 671.0 545 62.0
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 2.8e-189 665.6 501 63.7
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 1.1e-185 653.7 457 66.5
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 9.2e-185 650.6 467 67.0
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.0e-183 647.1 460 65.9
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.9e-182 642.9 461 65.5
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 7.3e-182 641.0 463 68.3
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 2.9e-178 629.0 402 74.1
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 6.4e-178 627.9 393 77.1
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.9e-177 626.3 465 64.9
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.6e-176 623.2 403 72.7
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.1e-176 622.9 466 64.6
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 7.3e-174 614.4 402 71.9
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 7.3e-174 614.4 402 71.9
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 5.3e-172 608.2 379 75.5
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 8.4e-170 600.9 463 63.3
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.2e-168 597.0 375 74.7
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.6e-168 596.7 463 63.1
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.3e-167 592.8 417 67.6
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 4.9e-162 575.1 521 57.8
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.4e-161 573.5 365 75.9
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 1.2e-160 570.5 463 61.3
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 2.5e-150 536.2 463 57.9
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.2e-147 527.3 322 76.7
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 4.2e-145 518.8 368 69.0
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.8e-140 503.4 333 72.1
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 9.7e-134 481.1 373 66.2
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.4e-111 407.5 268 70.9
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 2.9e-93 346.7 224 71.4
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.2e-69 267.3 445 33.3
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 1.9e-68 264.2 167 73.1
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 2.9e-61 240.4 148 78.4
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 3.5e-51 206.8 235 52.3
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 3.5e-51 206.8 159 69.2
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.9e-45 187.2 119 71.4
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.8e-26 124.8 372 26.6
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 4.8e-24 116.7 429 25.9
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 6.3e-24 116.3 77 70.1
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 1.2e-19 102.1 518 24.7
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 6.1e-19 99.8 394 24.9
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 1.0e-18 99.0 393 24.4
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 5.0e-13 80.1 57 68.4
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 1.1e-07 62.4 214 28.5
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 1.4e-07 62.0 56 51.8


User provided reference genes

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