Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 7.6e-146 520.4 248 100.0
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 3.1e-115 418.7 248 75.0
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 3.1e-115 418.7 248 76.2
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 4.5e-114 414.8 248 77.4
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 7.7e-114 414.1 248 75.4
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 2.2e-113 412.5 244 76.6
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 6.5e-113 411.0 246 75.6
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 8.5e-113 410.6 244 75.4
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 1.1e-112 410.2 247 76.1
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.1e-112 410.2 244 75.0
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 1.9e-112 409.5 247 74.5
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 7.2e-112 407.5 246 74.4
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.2e-111 406.8 246 74.4
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.2e-111 406.8 247 74.5
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.2e-111 406.8 248 75.0
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.6e-111 406.4 248 74.6
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.1e-111 406.0 246 74.8
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 6.1e-111 404.4 244 74.2
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 6.1e-111 404.4 246 74.4
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 8.0e-111 404.1 246 73.6
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 8.0e-111 404.1 244 74.2
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.4e-110 403.3 241 75.1
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 1.4e-110 403.3 244 75.8
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.8e-110 402.9 246 73.6
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.8e-110 402.9 248 74.6
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.3e-110 402.5 246 74.0
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 4.0e-110 401.7 246 74.4
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 6.7e-110 401.0 248 73.0
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.2e-109 400.2 242 75.6
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.5e-109 399.8 248 70.2
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 4.4e-109 398.3 246 73.6
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 5.7e-109 397.9 248 72.6
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 9.7e-109 397.1 244 73.4
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 1.3e-108 396.7 245 72.7
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.7e-108 396.4 244 72.1
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.2e-108 396.0 244 72.1
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 2.2e-108 396.0 244 72.1
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 2.2e-108 396.0 245 73.1
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 2.8e-108 395.6 248 71.8
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 3.7e-108 395.2 247 72.5
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 4.8e-108 394.8 244 71.3
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 8.2e-108 394.0 245 71.8
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.1e-107 393.7 248 69.0
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.4e-107 393.3 245 71.0
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.8e-107 392.9 241 72.6
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.8e-107 392.9 241 72.6
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.8e-107 392.9 244 72.1
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 1.8e-107 392.9 240 74.6
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 3.1e-107 392.1 244 72.5
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 4.1e-107 391.7 244 73.0
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 7.0e-107 391.0 241 73.9
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 9.1e-107 390.6 244 71.3
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 9.1e-107 390.6 247 71.3
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.2e-106 390.2 244 70.9
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.2e-106 390.2 241 73.4
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 1.6e-106 389.8 244 72.1
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 2.0e-106 389.4 244 71.3
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 2.7e-106 389.0 244 70.5
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 5.9e-106 387.9 244 72.1
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 1.3e-105 386.7 244 71.7
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 5.0e-105 384.8 245 70.6
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 5.0e-105 384.8 239 72.8
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 5.0e-105 384.8 244 70.1
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 6.5e-105 384.4 244 70.9
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 6.5e-105 384.4 245 70.6
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 6.5e-105 384.4 244 70.5
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 8.5e-105 384.0 241 71.8
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 1.5e-104 383.3 245 70.2
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 1.5e-104 383.3 245 70.6
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.9e-104 382.9 244 69.7
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 7.2e-104 380.9 248 69.0
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 7.2e-104 380.9 246 71.1
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 9.4e-104 380.6 244 68.4
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 9.4e-104 380.6 244 68.4
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.2e-103 380.2 244 70.5
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.6e-103 378.6 248 68.1
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.6e-103 378.6 248 68.5
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 4.7e-103 378.3 244 69.7
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 8.0e-103 377.5 248 68.1
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.8e-102 376.3 241 70.1
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 3.0e-102 375.6 246 67.9
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 4.0e-102 375.2 247 66.4
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.5e-101 373.2 246 67.1
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.8e-99 366.3 226 73.0
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 4.1e-99 365.2 248 64.1
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.0e-97 360.5 259 65.6
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 5.5e-96 354.8 242 65.3
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 1.5e-93 346.7 247 65.2
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 1.3e-92 343.6 248 64.5
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 4.3e-88 328.6 248 58.1
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 5.2e-86 321.6 248 57.3
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.5e-85 320.1 195 74.4
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.7e-84 316.6 245 56.3
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.4e-83 313.5 245 59.2
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.5e-80 303.5 244 55.7
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 3.6e-71 272.3 159 77.4
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 6.6e-65 251.5 155 73.5
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 4.3e-64 248.8 249 49.0
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 1.6e-55 220.3 143 70.6
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.5e-48 196.4 109 74.3
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 3.1e-46 189.5 114 68.4
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 8.4e-44 181.4 103 76.7
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.3e-39 167.5 105 73.3
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.1e-39 166.8 115 64.3
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 2.0e-37 160.2 242 38.0
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 3.5e-34 149.4 156 48.1
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 5.3e-30 135.6 86 68.6
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.3e-20 104.4 59 78.0
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 9.7e-16 88.2 55 70.9
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.2e-13 81.3 53 62.3
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 7.9e-10 68.6 42 73.8
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 4.8e-07 59.3 42 59.5


User provided reference genes

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