Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 4.4e-104 381.3 196 100.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.2e-69 266.9 193 75.1
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.2e-66 256.9 192 73.4
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 2.1e-66 256.1 193 72.5
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 1.1e-65 253.8 195 72.8
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 4.0e-65 251.9 195 72.3
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.0e-65 251.9 192 73.4
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 8.9e-65 250.8 193 73.1
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 2.6e-64 249.2 195 69.7
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 9.9e-64 247.3 195 69.7
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.3e-63 246.9 174 75.9
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.3e-63 246.9 191 71.2
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 2.9e-63 245.7 195 70.8
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.4e-62 243.4 195 70.3
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 2.4e-62 242.7 194 71.1
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 5.4e-62 241.5 139 89.9
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 2.1e-61 239.6 167 77.2
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 2.1e-61 239.6 196 70.9
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 3.5e-61 238.8 193 68.9
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 7.8e-61 237.7 193 68.9
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.7e-60 236.5 195 67.2
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.0e-60 235.7 197 69.0
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.0e-60 235.7 197 69.0
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 3.0e-60 235.7 187 70.1
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 3.0e-60 235.7 186 70.4
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 5.1e-60 235.0 195 69.2
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 8.6e-60 234.2 192 68.8
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 8.6e-60 234.2 195 69.2
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.1e-59 233.8 197 68.0
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.1e-59 233.8 197 68.0
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.1e-59 233.8 197 68.0
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 1.9e-59 233.0 199 67.8
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 1.9e-59 233.0 197 69.0
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.5e-59 232.6 172 75.0
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 3.3e-59 232.3 195 67.2
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 3.3e-59 232.3 197 69.0
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 4.3e-59 231.9 195 66.2
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 4.3e-59 231.9 156 80.1
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 4.3e-59 231.9 141 83.7
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 5.6e-59 231.5 162 76.5
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 5.6e-59 231.5 198 65.7
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 7.3e-59 231.1 167 77.2
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 9.5e-59 230.7 196 66.8
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 9.5e-59 230.7 141 83.7
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 9.5e-59 230.7 195 66.7
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.2e-58 230.3 191 70.2
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 1.6e-58 229.9 139 84.2
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 2.1e-58 229.6 199 66.3
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 2.1e-58 229.6 196 67.9
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 2.8e-58 229.2 173 74.6
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.8e-58 229.2 191 69.6
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.8e-58 229.2 173 74.6
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 3.6e-58 228.8 144 81.9
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 4.7e-58 228.4 174 74.1
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 6.2e-58 228.0 195 66.7
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.2e-58 228.0 191 69.6
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.4e-57 226.9 194 68.0
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.4e-57 226.9 138 84.1
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 1.8e-57 226.5 172 73.3
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.8e-57 226.5 167 73.7
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.8e-57 226.5 196 65.3
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.4e-57 226.1 138 82.6
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 3.1e-57 225.7 150 79.3
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 4.0e-57 225.3 141 81.6
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 6.8e-57 224.6 150 79.3
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 6.8e-57 224.6 150 79.3
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 6.8e-57 224.6 191 69.1
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 6.8e-57 224.6 202 64.9
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 8.9e-57 224.2 144 83.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.2e-56 223.8 196 67.3
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.2e-56 223.8 139 84.9
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 1.5e-56 223.4 202 64.4
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.0e-56 223.0 142 79.6
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 2.6e-56 222.6 196 67.3
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 3.4e-56 222.2 196 68.4
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 3.4e-56 222.2 175 72.6
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.4e-56 222.2 170 74.1
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 3.4e-56 222.2 200 63.5
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.4e-56 222.2 191 65.4
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 3.4e-56 222.2 148 77.7
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 5.8e-56 221.5 175 72.0
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 7.6e-56 221.1 192 67.2
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 7.6e-56 221.1 198 66.7
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 7.6e-56 221.1 146 78.1
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 7.6e-56 221.1 202 64.4
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 9.9e-56 220.7 164 73.2
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 9.9e-56 220.7 168 73.2
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 9.9e-56 220.7 138 83.3
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.3e-55 220.3 149 77.9
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 1.3e-55 220.3 138 83.3
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.7e-55 219.9 195 65.6
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 2.2e-55 219.5 149 77.9
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 2.9e-55 219.2 196 66.3
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.9e-55 219.2 188 66.5
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 3.8e-55 218.8 171 71.3
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 3.8e-55 218.8 196 67.3
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 3.8e-55 218.8 139 81.3
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 3.8e-55 218.8 190 66.8
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 8.4e-55 217.6 145 79.3
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.9e-54 216.5 197 62.4
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.9e-54 216.5 197 62.9
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.9e-54 216.5 144 77.1
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 2.4e-54 216.1 176 70.5
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 3.2e-54 215.7 190 65.8
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 5.4e-54 214.9 192 65.6
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 5.4e-54 214.9 168 71.4
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 5.4e-54 214.9 141 78.7
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 7.1e-54 214.5 194 65.5
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 9.2e-54 214.2 164 72.0
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 9.2e-54 214.2 192 64.6
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 9.2e-54 214.2 138 80.4
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 1.2e-53 213.8 194 63.9
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 3.5e-53 212.2 141 80.1
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 1.7e-52 209.9 154 74.0
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.7e-52 209.9 189 66.1
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 6.6e-52 208.0 192 64.1
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 6.6e-52 208.0 205 61.0
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.1e-51 207.2 171 69.6
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.1e-51 207.2 195 61.5
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 1.1e-51 207.2 146 74.7
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.1e-51 207.2 138 79.0
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 2.5e-51 206.1 203 62.1
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 9.6e-51 204.1 176 68.8
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 3.6e-50 202.2 138 79.0
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.1e-49 200.7 125 84.8
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.1e-49 200.7 186 61.8
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 6.9e-49 198.0 113 90.3
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 6.9e-49 198.0 113 90.3
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 1.5e-48 196.8 156 71.8
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 2.6e-48 196.1 112 91.1
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 3.4e-48 195.7 111 90.1
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 3.4e-48 195.7 195 59.5
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.3e-47 193.7 188 59.0
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.3e-47 193.7 139 74.1
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 1.3e-47 193.7 164 67.1
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 3.8e-47 192.2 111 88.3
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 8.4e-47 191.0 137 71.5
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.9e-46 189.9 145 71.7
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.9e-46 189.9 154 68.2
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.2e-46 189.1 193 60.1
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.6e-45 185.3 191 60.2
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.0e-44 184.1 107 89.7
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 3.0e-44 182.6 177 63.3
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 4.3e-43 178.7 109 81.7
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.4e-41 172.9 200 50.5
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.1e-41 172.6 202 55.0
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.3e-41 171.8 202 55.4
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 6.9e-41 171.4 116 75.0
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 6.9e-41 171.4 342 38.0
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 3.4e-40 169.1 113 74.3
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 2.9e-39 166.0 152 63.2
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 3.8e-39 165.6 115 74.8
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 1.2e-37 160.6 131 66.4
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 1.2e-37 160.6 138 65.2
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.2e-30 135.6 103 71.8
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 1.9e-27 126.7 111 57.7
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.9e-27 126.7 90 72.2
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.4e-25 119.8 128 57.0
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.0e-23 114.4 135 48.9
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 6.5e-23 111.7 130 52.3
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.4e-22 110.5 99 64.6
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 1.4e-22 110.5 123 55.3
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 2.7e-21 106.3 86 70.9
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 1.8e-20 103.6 86 69.8
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 1.8e-20 103.6 86 69.8
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 2.0e-16 90.1 89 58.4
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 4.2e-14 82.4 44 95.5
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 2.1e-13 80.1 47 85.1
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 3.6e-13 79.3 48 85.4
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 5.3e-09 65.5 38 84.2
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-08 63.9 90 47.8
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-08 63.9 90 47.8
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-08 63.9 83 50.6
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-08 63.9 90 47.8
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-08 63.9 90 47.8
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 2.6e-08 63.2 114 44.7
AagrBONN_evm.TU.Sc2ySwM_228.5940 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.4e-08 62.8 88 47.7
AagrBONN_evm.TU.Sc2ySwM_128.2 Anthoceros agrestis HOM05D010958 ORTHO05D018301 1.7e-07 60.5 80 48.8
AagrBONN_evm.TU.Sc2ySwM_362.2265 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.7e-07 60.5 85 47.1
AagrBONN_evm.TU.Sc2ySwM_228.2003 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.5e-07 58.2 71 46.5
AagrBONN_evm.TU.Sc2ySwM_117.883 Anthoceros agrestis HOM05D010958 ORTHO05D000003 1.4e-06 57.4 99 41.4
AagrBONN_evm.TU.Sc2ySwM_340.464 Anthoceros agrestis HOM05D010958 ORTHO05D018301 2.5e-06 56.6 124 38.7


User provided reference genes

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