Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 4.1e-94 348.2 197 100.0
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.3e-36 157.1 145 69.7
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 1.8e-36 156.8 131 74.8
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.1e-35 154.1 106 83.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.9e-35 153.3 106 85.8
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.3e-35 152.5 106 86.8
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.7e-35 151.8 106 86.8
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.6e-34 150.2 150 66.7
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.2e-34 149.8 149 67.1
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.2e-34 147.9 106 81.1
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.2e-34 147.9 106 81.1
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 8.2e-34 147.9 113 80.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.4e-33 147.1 106 82.1
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.4e-33 147.1 106 82.1
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.4e-33 146.4 136 69.1
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 2.4e-33 146.4 115 75.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.4e-33 146.4 106 83.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.4e-33 146.4 106 84.0
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 2.4e-33 146.4 140 69.3
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.1e-33 145.6 146 63.0
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 5.3e-33 145.2 104 83.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 5.3e-33 145.2 149 65.1
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 6.9e-33 144.8 141 66.0
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 9.0e-33 144.4 99 83.8
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 9.0e-33 144.4 104 84.6
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.2e-32 144.1 148 62.8
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.5e-32 143.7 108 81.5
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.5e-32 143.7 108 78.7
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 3.4e-32 142.5 104 81.7
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.4e-32 142.5 104 81.7
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 3.4e-32 142.5 139 66.9
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 3.4e-32 142.5 109 79.8
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 4.5e-32 142.1 147 64.6
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 4.5e-32 142.1 150 63.3
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 5.9e-32 141.7 109 77.1
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 5.9e-32 141.7 152 64.5
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 5.9e-32 141.7 144 65.3
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 7.7e-32 141.4 142 66.2
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 7.7e-32 141.4 122 71.3
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 7.7e-32 141.4 120 75.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.0e-31 141.0 141 63.1
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.3e-31 140.6 102 80.4
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.3e-31 140.6 100 85.0
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.3e-31 140.6 140 67.9
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.7e-31 140.2 145 64.8
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.7e-31 140.2 145 64.8
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 2.2e-31 139.8 145 64.8
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 2.2e-31 139.8 145 64.8
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 2.2e-31 139.8 137 65.7
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.2e-31 139.8 116 72.4
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 3.8e-31 139.0 99 81.8
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 5.0e-31 138.7 100 84.0
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 5.0e-31 138.7 143 65.7
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.0e-31 138.7 151 64.2
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 6.5e-31 138.3 104 78.8
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 8.5e-31 137.9 107 77.6
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 1.9e-30 136.7 116 72.4
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 5.5e-30 135.2 99 79.8
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 5.5e-30 135.2 107 72.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 5.5e-30 135.2 122 66.4
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 5.5e-30 135.2 105 77.1
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 7.2e-30 134.8 118 69.5
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 7.2e-30 134.8 118 58.5
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 7.2e-30 134.8 99 84.8
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 7.2e-30 134.8 96 87.5
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 7.2e-30 134.8 107 72.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 7.2e-30 134.8 107 72.9
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.2e-29 134.0 138 63.0
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 1.2e-29 134.0 143 64.3
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.6e-29 133.7 107 73.8
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 2.7e-29 132.9 115 58.3
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.6e-29 132.1 107 71.0
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 6.1e-29 131.7 112 69.6
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 6.1e-29 131.7 113 72.6
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 7.9e-29 131.3 103 80.6
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 7.9e-29 131.3 112 67.0
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.0e-28 131.0 107 76.6
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.8e-28 130.2 133 63.2
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 2.3e-28 129.8 112 74.1
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 3.0e-28 129.4 99 78.8
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 5.1e-28 128.6 99 78.8
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 6.7e-28 128.3 136 61.8
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 8.8e-28 127.9 105 75.2
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 8.8e-28 127.9 109 76.1
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 2.0e-27 126.7 99 80.8
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 2.0e-27 126.7 101 76.2
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.5e-27 126.3 94 85.1
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.3e-27 125.9 99 73.7
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 9.7e-27 124.4 144 56.9
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.3e-26 124.0 151 56.3
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.7e-26 123.6 97 76.3
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 3.7e-26 122.5 155 58.1
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 6.3e-26 121.7 100 71.0
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 2.4e-25 119.8 89 65.2
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 4.1e-25 119.0 98 77.6
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 2.0e-24 116.7 89 79.8
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 3.4e-24 115.9 119 64.7
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.2e-23 113.2 123 62.6
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 3.6e-21 105.9 147 49.7
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.4e-20 104.0 76 82.9
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 3.3e-19 99.4 72 84.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 5.7e-19 98.6 83 71.1
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 7.4e-19 98.2 72 81.9
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.3e-18 97.4 72 77.8
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.3e-12 76.6 48 75.0


User provided reference genes

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