Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G291 Amborella trichopoda HOM05D004953 ORTHO05D006193 7.6e-39 163.3 80 100.0
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 2.2e-22 108.6 67 79.1
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 3.0e-11 71.6 67 50.7
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 7.5e-10 67.0 67 50.7
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 3.7e-09 64.7 74 45.9
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 8.2e-09 63.5 80 43.8
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 1.4e-08 62.8 74 45.9
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.4e-08 62.8 70 47.1
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 1.4e-08 62.8 74 44.6
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 2.4e-08 62.0 74 44.6
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 3.1e-08 61.6 67 46.3
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 4.1e-08 61.2 67 47.8
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 5.3e-08 60.8 70 45.7
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.3e-08 60.8 70 45.7
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 7.0e-08 60.5 70 45.7
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 7.0e-08 60.5 70 45.7
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 7.0e-08 60.5 67 43.3
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 1.2e-07 59.7 67 46.3
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 1.2e-07 59.7 67 46.3
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 1.6e-07 59.3 67 41.8
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 2.0e-07 58.9 67 44.8
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.7e-07 58.5 67 43.3
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.7e-07 58.5 67 43.3
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 2.7e-07 58.5 67 43.3
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 2.7e-07 58.5 67 40.3
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 4.5e-07 57.8 67 43.3
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 4.5e-07 57.8 67 43.3
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 4.5e-07 57.8 80 41.2
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 4.5e-07 57.8 80 40.0
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 5.9e-07 57.4 67 43.3
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 5.9e-07 57.4 67 43.3
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 5.9e-07 57.4 67 41.8
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 7.7e-07 57.0 67 40.3
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 7.7e-07 57.0 67 41.8
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 1.0e-06 56.6 67 41.8
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 1.0e-06 56.6 67 43.3
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 1.7e-06 55.8 67 41.8
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 1.7e-06 55.8 67 44.8
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 1.7e-06 55.8 80 36.2
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 2.2e-06 55.5 67 40.3
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 2.2e-06 55.5 67 40.3
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 2.2e-06 55.5 67 38.8
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 2.9e-06 55.1 80 38.8
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 2.9e-06 55.1 67 37.3
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 3.8e-06 54.7 67 40.3
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 3.8e-06 54.7 67 41.8
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 3.8e-06 54.7 67 41.8
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 5.0e-06 54.3 67 40.3
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 5.0e-06 54.3 67 43.3
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 6.5e-06 53.9 67 40.3
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 6.5e-06 53.9 67 40.3
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 6.5e-06 53.9 67 37.3
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 8.5e-06 53.5 67 40.3
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 8.5e-06 53.5 80 40.0
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 8.5e-06 53.5 67 43.3
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 8.5e-06 53.5 67 41.8


User provided reference genes

Program Settings