Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 4.5e-80 301.2 152 100.0
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 5.7e-27 124.8 143 47.6
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 5.7e-27 124.8 137 51.1
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 1.7e-26 123.2 96 65.6
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 2.2e-26 122.9 121 57.0
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 4.8e-26 121.7 120 55.8
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 6.3e-26 121.3 126 51.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.1e-25 120.6 133 50.4
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.1e-25 120.6 111 55.9
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.4e-25 120.2 131 49.6
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.8e-25 119.8 129 53.5
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.8e-25 119.8 129 53.5
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.4e-25 119.4 96 62.5
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 4.1e-25 118.6 122 54.1
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 4.1e-25 118.6 96 63.5
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 5.4e-25 118.2 129 51.9
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 5.4e-25 118.2 129 51.2
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 7.0e-25 117.9 99 57.6
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 7.0e-25 117.9 143 50.3
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.2e-24 117.1 129 52.7
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 2.7e-24 115.9 146 45.9
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.5e-24 115.5 127 53.5
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 3.5e-24 115.5 122 52.5
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 3.5e-24 115.5 131 50.4
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 4.5e-24 115.2 109 55.0
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 5.9e-24 114.8 123 50.4
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 5.9e-24 114.8 114 55.3
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 1.0e-23 114.0 128 52.3
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.7e-23 113.2 114 54.4
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 1.7e-23 113.2 116 55.2
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 1.7e-23 113.2 131 49.6
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 2.9e-23 112.5 153 45.8
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 3.8e-23 112.1 133 51.1
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 3.8e-23 112.1 119 54.6
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 5.0e-23 111.7 125 51.2
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 5.0e-23 111.7 131 48.1
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 6.5e-23 111.3 137 49.6
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 6.5e-23 111.3 101 53.5
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 8.5e-23 110.9 134 49.3
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.1e-22 110.5 71 77.5
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.2e-22 109.0 97 59.8
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 3.2e-22 109.0 134 46.3
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 3.2e-22 109.0 109 53.2
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 5.5e-22 108.2 115 51.3
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 5.5e-22 108.2 98 57.1
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 5.5e-22 108.2 116 54.3
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 7.2e-22 107.8 116 53.4
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 9.5e-22 107.5 113 50.4
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 2.1e-21 106.3 85 65.9
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.8e-21 105.9 99 56.6
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 6.1e-21 104.8 111 50.5
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 6.1e-21 104.8 114 47.4
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 8.0e-21 104.4 70 74.3
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.4e-20 103.6 142 47.2
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.4e-20 103.6 93 60.2
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 1.4e-20 103.6 98 56.1
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 2.3e-20 102.8 114 50.0
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 2.3e-20 102.8 108 53.7
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 3.0e-20 102.4 119 48.7
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 4.0e-20 102.1 106 53.8
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 4.0e-20 102.1 100 57.0
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 5.2e-20 101.7 95 56.8
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 6.8e-20 101.3 129 45.7
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 6.8e-20 101.3 143 45.5
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 8.8e-20 100.9 92 58.7
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.2e-19 100.5 90 60.0
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.2e-19 100.5 95 54.7
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.5e-19 100.1 93 58.1
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 1.5e-19 100.1 142 43.7
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 1.5e-19 100.1 128 46.9
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 2.0e-19 99.8 142 43.0
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 2.0e-19 99.8 93 55.9
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.0e-19 99.8 108 50.9
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 2.6e-19 99.4 92 56.5
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 2.6e-19 99.4 111 53.2
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 3.4e-19 99.0 92 57.6
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 3.4e-19 99.0 106 51.9
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 4.4e-19 98.6 98 57.1
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 5.7e-19 98.2 92 55.4
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 5.7e-19 98.2 114 46.5
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 5.7e-19 98.2 96 53.1
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 7.5e-19 97.8 73 69.9
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 9.8e-19 97.4 92 55.4
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 9.8e-19 97.4 102 53.9
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 9.8e-19 97.4 72 63.9
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.3e-18 97.1 72 63.9
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.2e-18 96.3 111 46.8
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.2e-18 96.3 101 49.5
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 2.8e-18 95.9 96 53.1
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 4.9e-18 95.1 73 63.0
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 8.3e-18 94.4 136 43.4
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 8.3e-18 94.4 102 51.0
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.4e-17 93.6 84 54.8
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.8e-17 93.2 92 50.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 4.1e-17 92.0 76 61.8
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 7.0e-17 91.3 74 63.5
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.2e-16 90.5 100 48.0
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.6e-16 90.1 108 42.6
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 2.0e-16 89.7 93 49.5
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 4.5e-16 88.6 107 46.7
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 3.8e-15 85.5 102 46.1
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.9e-14 83.2 77 49.4
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.2e-13 80.5 60 66.7
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 4.4e-11 72.0 66 56.1
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 9.8e-11 70.9 54 59.3
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 2.2e-10 69.7 46 69.6
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.1e-09 67.4 71 50.7
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 9.5e-06 54.3 77 44.2


User provided reference genes

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