Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 0.0e+00 1598.6 794 100.0
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 5.4e-161 572.4 789 43.0
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 8.7e-159 565.1 784 43.1
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 8.1e-157 558.5 812 41.3
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 1.1e-156 558.1 789 41.8
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 1.2e-152 544.7 801 41.3
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 4.6e-152 542.7 801 41.4
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 5.8e-147 525.8 795 40.6
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.9e-145 520.8 777 41.2
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 2.3e-143 513.8 738 42.3
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 1.1e-142 511.5 740 41.6
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 1.3e-141 508.1 801 40.0
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.1e-140 505.0 806 39.0
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.4e-140 504.6 806 39.6
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 4.5e-139 499.6 780 40.5
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 1.3e-138 498.0 735 41.1
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 2.2e-138 497.3 806 39.1
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 1.1e-137 495.0 925 36.6
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 1.1e-137 495.0 824 38.6
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 2.1e-136 490.7 801 38.3
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 4.6e-136 489.6 731 40.5
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 1.3e-135 488.0 783 39.6
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 2.3e-135 487.3 733 40.8
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 3.9e-135 486.5 738 39.8
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 5.1e-135 486.1 799 38.4
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 6.7e-135 485.7 799 38.8
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.5e-134 484.6 808 39.0
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 1.9e-134 484.2 806 39.2
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 3.3e-134 483.4 789 37.8
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 8.2e-133 478.8 798 38.6
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 1.8e-132 477.6 763 38.1
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 3.1e-132 476.9 737 39.8
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 4.0e-132 476.5 733 39.4
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 9.0e-132 475.3 737 39.5
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 2.0e-131 474.2 512 50.4
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 2.6e-131 473.8 763 39.2
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 8.4e-130 468.8 806 38.8
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 2.7e-128 463.8 873 36.2
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 7.9e-128 462.2 810 38.6
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.3e-127 461.5 734 39.1
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 1.6e-125 454.5 786 36.5
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.4e-124 451.4 799 37.3
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 3.8e-122 443.4 610 41.5
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 8.5e-122 442.2 806 36.6
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 7.2e-121 439.1 851 34.8
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 9.3e-121 438.7 801 36.8
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 2.7e-120 437.2 812 35.3
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 1.8e-119 434.5 808 36.9
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 1.1e-118 431.8 791 35.3
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 1.5e-118 431.4 497 47.7
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 1.3e-117 428.3 770 37.7
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 6.9e-116 422.5 748 37.0
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 9.1e-116 422.2 613 41.3
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 1.7e-114 417.9 555 42.9
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 1.2e-112 411.8 733 38.5
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 5.1e-111 406.4 768 35.0
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.0e-110 404.4 555 42.3
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 5.7e-110 402.9 580 42.8
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 7.4e-110 402.5 744 37.1
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.6e-104 384.8 698 37.1
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 3.6e-104 383.6 538 42.0
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.5e-102 378.3 598 36.6
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 1.5e-102 378.3 602 40.9
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 9.1e-100 369.0 594 40.4
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 8.2e-93 345.9 563 38.7
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 6.1e-88 329.7 441 42.2
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 5.2e-87 326.6 776 30.7
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 1.4e-84 318.5 793 30.0
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 1.4e-79 302.0 407 43.5
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.8e-77 294.3 741 31.2
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 7.0e-76 289.7 366 44.0
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 9.2e-76 289.3 416 39.9
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 2.8e-72 277.7 859 26.9
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 3.0e-71 274.2 818 27.8
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 5.0e-66 256.9 470 36.2
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 7.3e-65 253.1 511 33.9
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 1.0e-58 232.6 491 32.0
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 6.4e-45 186.8 261 41.0
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.5e-33 148.3 220 40.0
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 5.3e-31 140.6 141 50.4
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 2.2e-29 135.2 206 37.4
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 7.1e-28 130.2 288 31.9
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 3.5e-27 127.9 206 35.0
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 2.6e-22 111.7 175 38.3
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 7.9e-19 100.1 276 30.4
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 3.7e-16 91.3 162 37.7
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 3.4e-14 84.7 116 39.7
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 7.6e-14 83.6 159 35.2
HPP92_010781 Vanilla planifolia HOM05D007669 ORTHO05D009624 7.6e-14 83.6 120 41.7
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 2.9e-13 81.6 145 33.8
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 5.5e-12 77.4 87 37.9
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 2.7e-11 75.1 148 33.1
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 7.9e-11 73.6 148 33.8
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 1.0e-10 73.2 128 34.4
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 2.3e-10 72.0 168 34.5
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 3.0e-10 71.6 63 52.4
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 6.7e-10 70.5 169 32.5
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 2.2e-08 65.5 117 32.5


User provided reference genes

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