Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 2.8e-109 398.7 206 100.0
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 2.2e-61 239.6 203 60.1
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 9.1e-60 234.2 203 59.1
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 4.7e-56 221.9 203 58.1
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 6.1e-56 221.5 198 56.1
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 1.0e-55 220.7 197 57.4
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 5.2e-55 218.4 198 56.6
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 8.8e-55 217.6 205 56.1
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 2.0e-54 216.5 198 55.6
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 2.6e-54 216.1 198 55.6
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 3.3e-54 215.7 197 56.3
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 4.4e-54 215.3 191 58.6
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 7.4e-54 214.5 199 55.8
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 9.7e-54 214.2 197 57.4
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 3.1e-52 209.1 203 54.7
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 9.1e-52 207.6 201 54.7
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 2.6e-51 206.1 196 55.1
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 2.6e-51 206.1 201 55.2
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 4.5e-51 205.3 199 54.8
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 1.0e-50 204.1 197 53.8
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 1.7e-50 203.4 197 52.3
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.7e-50 203.4 194 55.2
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 5.0e-50 201.8 196 53.6
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 1.5e-49 200.3 198 54.0
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.9e-49 199.9 200 54.0
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.9e-49 199.9 200 54.0
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 1.9e-49 199.9 203 53.7
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 2.5e-49 199.5 197 53.3
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 7.2e-49 198.0 198 52.5
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 1.2e-48 197.2 204 50.5
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 2.1e-48 196.4 205 53.7
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 2.1e-48 196.4 203 51.7
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 2.1e-48 196.4 190 54.2
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 2.7e-48 196.1 198 54.0
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 3.6e-48 195.7 198 53.0
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 4.7e-48 195.3 205 53.7
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 6.1e-48 194.9 200 52.0
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 6.1e-48 194.9 203 52.7
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 8.0e-48 194.5 200 50.0
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 8.0e-48 194.5 200 53.0
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 1.0e-47 194.1 197 51.8
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 1.4e-47 193.7 201 51.2
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 3.0e-47 192.6 198 51.0
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 3.0e-47 192.6 202 52.0
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 3.0e-47 192.6 198 51.5
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 4.0e-47 192.2 196 50.5
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 4.0e-47 192.2 179 57.0
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 6.7e-47 191.4 198 51.0
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.2e-46 190.7 185 55.1
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.5e-46 190.3 197 50.3
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 1.5e-46 190.3 198 51.0
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 2.6e-46 189.5 198 51.0
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 2.6e-46 189.5 190 51.1
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 3.3e-46 189.1 198 50.5
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 3.3e-46 189.1 197 50.8
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 4.4e-46 188.7 199 49.2
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 7.5e-46 188.0 199 51.8
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 1.3e-45 187.2 199 53.8
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 1.3e-45 187.2 199 48.7
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 1.3e-45 187.2 197 49.7
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 1.7e-45 186.8 201 48.8
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 3.7e-45 185.7 197 54.3
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 4.8e-45 185.3 198 51.5
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 1.1e-44 184.1 199 48.2
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 1.4e-44 183.7 201 50.2
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 1.8e-44 183.3 197 51.8
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 1.8e-44 183.3 205 50.7
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 4.1e-44 182.2 203 51.2
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 5.3e-44 181.8 190 51.1
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 2.0e-43 179.9 197 49.7
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 4.5e-43 178.7 190 50.0
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 1.3e-42 177.2 164 57.3
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 2.2e-42 176.4 201 46.3
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 2.2e-42 176.4 197 48.7
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 2.9e-42 176.0 196 48.0
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 2.5e-41 172.9 201 47.8
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 3.2e-41 172.6 190 48.9
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 3.2e-41 172.6 213 46.5
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 7.2e-41 171.4 201 50.2
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 7.2e-41 171.4 202 45.5
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 2.1e-40 169.9 202 45.0
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 2.7e-40 169.5 197 46.7
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 2.7e-40 169.5 201 46.3
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 4.7e-40 168.7 189 46.6
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 6.1e-40 168.3 199 48.7
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 1.0e-39 167.5 202 43.6
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 1.0e-39 167.5 202 43.6
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 1.0e-39 167.5 199 47.2
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 1.8e-39 166.8 199 47.7
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 2.3e-39 166.4 200 46.5
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 3.0e-39 166.0 202 44.6
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 5.2e-39 165.2 201 45.8
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 6.8e-39 164.9 197 45.7
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 1.2e-38 164.1 202 43.6
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 2.0e-38 163.3 126 58.7
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 4.4e-38 162.2 191 46.6
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 7.5e-38 161.4 200 45.5
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 1.7e-37 160.2 205 43.4
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 1.7e-37 160.2 202 43.6
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 6.3e-37 158.3 197 44.2
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 1.1e-36 157.5 203 44.8
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 1.1e-36 157.5 203 44.8
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 3.1e-36 156.0 216 40.7
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 4.1e-36 155.6 212 41.5
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 5.4e-36 155.2 206 43.2
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 7.0e-36 154.8 201 45.3
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 7.0e-36 154.8 206 43.2
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 7.0e-36 154.8 212 41.0
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 1.2e-35 154.1 192 43.8
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 1.2e-35 154.1 140 52.1
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 1.0e-34 151.0 201 43.8
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 6.5e-34 148.3 202 40.6
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 8.6e-34 147.9 189 39.2
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 8.6e-34 147.9 203 42.4
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 1.5e-25 120.6 197 39.1
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 3.3e-25 119.4 179 41.3
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 3.6e-24 115.9 123 55.3
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 8.0e-24 114.8 192 39.6
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 1.5e-22 110.5 191 35.1
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 3.4e-22 109.4 119 54.6
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 2.2e-21 106.7 183 33.3
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 2.2e-21 106.7 83 59.0
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 1.4e-20 104.0 196 34.2
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 1.4e-20 104.0 184 34.2
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 1.4e-20 104.0 184 34.2
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 1.8e-20 103.6 203 32.5
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 3.2e-20 102.8 183 36.1
Mapoly0130s0032 Marchantia polymorpha HOM05D004800 ORTHO05D005842 3.2e-20 102.8 181 33.7
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 3.9e-18 95.9 200 33.0
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 9.5e-17 91.3 185 32.4
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 1.2e-16 90.9 97 43.3
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 2.8e-16 89.7 200 33.5
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 6.2e-16 88.6 193 32.6
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 3.4e-14 82.8 186 30.6
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 4.1e-12 75.9 171 31.6
CBR_g8579 Chara braunii HOM05D004800 ORTHO05D005842 4.6e-11 72.4 234 25.6
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 4.6e-11 72.4 95 37.9
Zm00001eb353150 Zea mays HOM05D004800 ORTHO05D005842 2.1e-08 63.5 136 36.8
MCO11G643 Micromonas commoda HOM05D004800 ORTHO05D005842 8.1e-08 61.6 156 30.1
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 3.4e-06 56.2 45 55.6


User provided reference genes

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