Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.3e-221 772.7 384 100.0
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 6.1e-126 454.9 400 60.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 2.3e-125 453.0 397 59.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 3.0e-125 452.6 400 60.0
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 7.5e-124 448.0 393 59.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.8e-123 446.0 383 60.6
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 4.8e-123 445.3 380 60.8
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 6.3e-123 444.9 397 57.2
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 2.4e-122 443.0 390 59.5
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 5.3e-122 441.8 378 58.2
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 4.5e-121 438.7 378 58.7
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 7.7e-121 438.0 402 58.0
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.0e-120 437.6 395 57.5
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 1.3e-120 437.2 374 60.2
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.8e-120 435.6 374 59.9
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 3.6e-118 429.1 373 57.4
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.8e-117 426.8 390 59.7
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.0e-117 426.0 395 57.2
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 4.0e-117 425.6 346 61.0
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 5.2e-117 425.2 392 57.4
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 8.8e-117 424.5 391 57.5
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 8.8e-117 424.5 367 58.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.2e-116 424.1 384 55.5
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.5e-116 423.7 371 58.5
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 4.4e-116 422.2 386 58.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 5.7e-116 421.8 377 58.6
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.3e-115 420.6 385 58.4
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.3e-115 420.6 382 56.8
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.8e-115 419.5 378 59.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 4.1e-114 415.6 394 53.0
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 5.4e-114 415.2 385 54.3
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.6e-113 413.7 390 54.6
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 3.5e-113 412.5 354 57.9
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 5.9e-113 411.8 367 59.1
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.0e-112 411.0 372 58.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.3e-112 410.6 380 54.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.3e-112 410.6 384 55.7
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.7e-112 410.2 326 61.7
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.8e-112 409.1 373 58.2
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 5.0e-112 408.7 392 55.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 5.0e-112 408.7 349 58.2
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 6.5e-112 408.3 384 54.2
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.1e-111 407.5 382 56.3
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.1e-111 407.5 367 55.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.5e-111 407.1 382 55.0
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.5e-111 406.4 350 58.0
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 2.5e-111 406.4 382 53.4
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 4.2e-111 405.6 297 67.7
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 5.5e-111 405.2 383 54.0
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.2e-111 404.8 392 52.8
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 9.5e-111 404.4 352 58.8
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.2e-110 404.1 349 57.9
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 1.6e-110 403.7 356 57.3
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.6e-110 403.7 394 53.3
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.6e-110 403.7 382 53.1
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.7e-110 402.9 352 58.8
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 2.7e-110 402.9 341 59.5
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 3.6e-110 402.5 352 58.2
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 4.7e-110 402.1 341 59.2
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.0e-109 401.0 341 59.2
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.0e-109 401.0 425 52.7
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.0e-109 401.0 372 56.7
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.8e-109 400.2 352 57.7
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 2.3e-109 399.8 351 57.8
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.3e-109 399.8 357 56.9
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 4.0e-109 399.1 355 57.2
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.0e-108 396.7 355 57.2
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.6e-108 396.4 360 56.9
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 4.4e-108 395.6 347 59.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 4.9e-107 392.1 372 55.9
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.4e-106 390.6 327 60.6
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 2.7e-105 386.3 345 58.3
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 4.5e-105 385.6 376 54.5
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 7.7e-105 384.8 341 58.7
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.3e-104 384.0 401 54.1
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.7e-104 383.6 354 56.2
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 2.3e-104 383.3 371 54.2
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.3e-103 379.0 378 53.2
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 9.5e-103 377.9 385 53.2
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 3.6e-102 375.9 387 55.0
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 7.5e-100 368.2 360 55.6
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.1e-98 364.4 391 52.2
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.8e-98 363.6 293 62.1
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 8.6e-96 354.8 281 60.5
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 3.6e-94 349.4 383 49.1
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 4.7e-94 349.0 290 60.7
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.1e-93 346.3 359 51.0
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.1e-93 346.3 359 50.4
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.0e-93 345.9 286 62.6
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 5.2e-93 345.5 290 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 7.5e-92 341.7 277 59.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.1e-90 337.8 398 46.5
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 5.4e-90 335.5 335 51.6
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.0e-89 332.0 394 47.7
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.3e-88 330.9 240 68.3
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 2.1e-86 323.6 260 62.3
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.0e-84 317.0 243 62.6
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.2e-83 313.5 349 50.1
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 7.8e-81 305.1 284 54.9
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 4.3e-79 299.3 314 51.6
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.8e-77 292.0 257 59.5
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.7e-75 287.3 303 49.5
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.6e-73 279.3 185 69.7
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 3.1e-69 266.5 343 46.9
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 4.0e-69 266.2 177 70.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.6e-68 263.5 301 50.2
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 8.1e-54 215.3 256 46.5
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 7.6e-52 208.8 205 54.6
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.2e-49 201.4 154 63.6
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 3.9e-48 196.4 311 40.2
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 5.5e-42 176.0 317 38.2
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.7e-38 163.3 205 43.4
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.8e-35 153.3 161 50.9
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.5e-34 149.4 140 55.0
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 3.0e-24 117.1 99 61.6
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 3.1e-13 80.5 118 39.0
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 4.2e-10 70.1 55 56.4
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 6.3e-06 56.2 54 48.1


User provided reference genes

Program Settings