Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 5.3e-122 441.0 224 100.0
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 7.0e-82 307.8 189 77.8
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.7e-80 303.1 193 75.1
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 3.9e-80 302.0 191 74.3
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 3.9e-80 302.0 189 76.2
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 2.1e-78 296.2 216 67.1
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 2.1e-78 296.2 175 79.4
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 6.2e-78 294.7 216 70.4
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 8.0e-78 294.3 193 72.5
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 3.1e-77 292.4 217 69.6
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 5.2e-77 291.6 189 72.5
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 6.8e-77 291.2 193 71.0
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 6.8e-77 291.2 200 70.0
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.0e-76 289.7 192 70.3
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 4.4e-76 288.5 202 70.3
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 5.8e-76 288.1 188 72.3
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 5.8e-76 288.1 194 71.6
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 7.5e-76 287.7 216 67.1
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.3e-75 287.0 193 72.0
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 2.9e-75 285.8 200 68.0
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 2.9e-75 285.8 207 67.6
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 3.7e-75 285.4 208 67.3
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 4.9e-75 285.0 216 63.9
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.1e-74 283.9 190 73.7
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 1.1e-74 283.9 193 69.9
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 1.1e-74 283.9 204 65.2
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.4e-74 283.5 215 67.0
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 1.9e-74 283.1 199 68.3
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.9e-74 283.1 207 67.1
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 2.4e-74 282.7 209 66.5
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 3.2e-74 282.3 202 70.8
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 3.2e-74 282.3 188 71.3
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 4.1e-74 282.0 192 71.9
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 9.2e-74 280.8 204 67.2
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 1.2e-73 280.4 189 70.4
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 2.7e-73 279.3 196 69.4
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 4.6e-73 278.5 190 70.0
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 4.6e-73 278.5 184 70.7
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 7.8e-73 277.7 203 66.5
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 7.8e-73 277.7 194 68.6
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 7.8e-73 277.7 206 68.4
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 1.7e-72 276.6 205 64.9
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.7e-72 276.6 210 62.9
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 2.3e-72 276.2 205 65.4
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 3.0e-72 275.8 202 67.3
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 3.0e-72 275.8 175 73.1
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 3.9e-72 275.4 191 69.1
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 3.9e-72 275.4 191 71.7
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 6.6e-72 274.6 202 67.3
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 6.6e-72 274.6 213 65.3
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 8.6e-72 274.2 202 66.3
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 1.1e-71 273.9 210 66.7
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 1.5e-71 273.5 193 65.8
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 1.5e-71 273.5 201 69.2
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 2.5e-71 272.7 177 72.3
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 4.3e-71 271.9 189 66.7
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 4.3e-71 271.9 183 72.1
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 4.3e-71 271.9 203 64.5
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 5.6e-71 271.6 195 71.3
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 5.6e-71 271.6 203 68.0
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 7.3e-71 271.2 195 71.3
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 7.3e-71 271.2 205 65.4
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 9.5e-71 270.8 207 64.7
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.6e-70 270.0 191 70.2
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 1.6e-70 270.0 219 62.1
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 2.8e-70 269.2 169 74.0
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 3.6e-70 268.9 169 74.6
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 3.6e-70 268.9 169 74.6
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 3.6e-70 268.9 189 67.2
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 4.7e-70 268.5 211 64.5
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 6.2e-70 268.1 168 74.4
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 6.2e-70 268.1 169 74.0
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 8.1e-70 267.7 196 65.8
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 8.1e-70 267.7 169 74.0
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 8.1e-70 267.7 169 74.0
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 8.1e-70 267.7 199 68.8
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 8.1e-70 267.7 199 68.8
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 1.1e-69 267.3 175 72.6
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 1.1e-69 267.3 169 73.4
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 1.4e-69 266.9 213 64.3
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 1.4e-69 266.9 169 73.4
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 1.4e-69 266.9 168 73.8
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 1.8e-69 266.5 169 73.4
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 4.0e-69 265.4 199 67.8
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 5.2e-69 265.0 200 64.5
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 6.8e-69 264.6 193 69.4
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 8.9e-69 264.2 192 67.2
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 2.0e-68 263.1 180 69.4
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 4.4e-68 261.9 198 64.6
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 7.5e-68 261.2 169 72.2
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 7.5e-68 261.2 169 72.2
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 7.5e-68 261.2 169 72.2
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 7.5e-68 261.2 176 72.7
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 1.3e-67 260.4 207 62.3
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 1.3e-67 260.4 220 61.4
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 2.2e-67 259.6 202 66.3
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 2.9e-67 259.2 184 67.4
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 4.9e-67 258.5 208 61.1
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 4.9e-67 258.5 175 68.6
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 1.1e-66 257.3 215 59.5
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 1.1e-66 257.3 200 61.5
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 1.6e-65 253.4 175 67.4
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 1.7e-64 250.0 202 63.9
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 8.1e-62 241.1 222 57.2
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 1.4e-61 240.4 240 53.8
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 2.3e-61 239.6 207 58.9
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 5.2e-61 238.4 198 63.1
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 8.9e-61 237.7 190 61.1
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.2e-60 237.3 222 56.3
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 3.4e-60 235.7 209 57.4
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 1.9e-58 229.9 164 65.9
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 1.9e-58 229.9 164 65.9
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 3.2e-58 229.2 164 66.5
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 9.2e-58 227.6 169 65.1
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 1.2e-57 227.3 275 45.1
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 2.1e-57 226.5 221 53.8
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 2.3e-56 223.0 286 44.4
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 8.9e-53 211.1 140 69.3
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 1.1e-50 204.1 147 66.7
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 2.4e-50 203.0 182 58.2
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 5.4e-50 201.8 189 53.4
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 1.2e-49 200.7 136 70.6
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 3.6e-46 189.1 121 75.2
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 3.4e-44 182.6 139 66.2
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 9.9e-44 181.0 134 66.4
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 1.2e-41 174.1 140 61.4
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 3.5e-41 172.6 110 71.8
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 7.9e-41 171.4 153 57.5
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 4.3e-39 165.6 93 81.7
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 9.6e-39 164.5 107 69.2
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 1.6e-38 163.7 107 71.0
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 2.8e-38 162.9 113 65.5
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 1.8e-37 160.2 131 58.0
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 1.8e-37 160.2 105 67.6
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 3.5e-33 146.0 100 67.0
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 1.0e-32 144.4 95 71.6
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 1.8e-32 143.7 93 72.0
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 2.7e-25 119.8 140 49.3
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 2.7e-25 119.8 140 49.3
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 5.3e-21 105.5 66 72.7
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 6.9e-21 105.1 90 55.6
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.6e-20 103.2 73 63.0
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 1.4e-18 97.4 114 49.1
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 1.8e-13 80.5 88 51.1
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 2.0e-12 77.0 54 64.8
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 5.9e-12 75.5 59 62.7
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 7.7e-12 75.1 209 29.7
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 1.4e-10 70.9 46 63.0
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.9e-10 70.5 48 70.8


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