Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G180 Amborella trichopoda HOM05D003759 ORTHO05D004149 7.0e-75 283.9 144 100.0
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.3e-15 87.0 99 47.5
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.6e-15 86.7 122 45.9
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.1e-15 86.3 109 49.5
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 2.2e-12 76.3 119 38.7
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 2.2e-12 76.3 119 38.7
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 2.9e-12 75.9 102 43.1
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 3.8e-12 75.5 106 42.5
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 1.1e-11 73.9 126 39.7
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 1.1e-11 73.9 102 41.2
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 2.4e-11 72.8 115 37.4
SEGI_22308 Sequoiadendron giganteum HOM05D024907 ORTHO05D030594 3.2e-11 72.4 65 56.9
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 2.1e-10 69.7 118 39.0
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 6.0e-10 68.2 117 36.8
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.8e-09 66.6 144 31.9
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 1.5e-08 63.5 99 41.4
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.5e-08 63.5 101 41.6
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 1.5e-08 63.5 108 40.7
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 1.9e-08 63.2 98 39.8
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.9e-08 63.2 110 40.0
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 1.9e-08 63.2 110 40.9
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 3.3e-08 62.4 103 40.8
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 3.3e-08 62.4 115 33.0
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 5.6e-08 61.6 110 40.9
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 7.4e-08 61.2 99 41.4
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 7.4e-08 61.2 128 32.0
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 9.6e-08 60.8 103 38.8
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 9.6e-08 60.8 116 41.4
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 1.3e-07 60.5 130 33.1
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 1.3e-07 60.5 77 45.5
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 1.6e-07 60.1 110 39.1
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 2.1e-07 59.7 98 38.8
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.1e-07 59.7 124 36.3
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 2.1e-07 59.7 104 37.5
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 6.2e-07 58.2 63 52.4
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 6.2e-07 58.2 81 44.4
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 8.1e-07 57.8 104 37.5
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 8.1e-07 57.8 109 33.9
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 1.1e-06 57.4 90 41.1
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 1.1e-06 57.4 103 37.9
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.1e-06 57.4 146 30.1
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.1e-06 57.4 146 30.1
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 1.1e-06 57.4 106 31.1
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 1.1e-06 57.4 108 32.4
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.1e-06 57.4 114 36.0
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 1.4e-06 57.0 120 35.8
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.4e-06 57.0 103 37.9
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 2.4e-06 56.2 113 41.6
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 2.4e-06 56.2 121 36.4
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 3.1e-06 55.8 105 35.2
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 4.0e-06 55.5 120 32.5
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 5.3e-06 55.1 118 33.9
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 9.0e-06 54.3 124 34.7
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 9.0e-06 54.3 124 34.7


User provided reference genes

Program Settings