Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 3.5e-122 441.8 253 100.0
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 6.4e-15 85.5 195 35.9
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.4e-14 83.6 202 35.1
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 3.2e-14 83.2 199 35.7
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 2.1e-13 80.5 194 33.0
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 4.6e-13 79.3 201 33.3
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 5.1e-12 75.9 181 33.1
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 8.7e-12 75.1 207 34.3
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 1.5e-11 74.3 184 32.6
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.9e-11 73.9 205 32.7
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 3.3e-11 73.2 201 34.3
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 4.3e-11 72.8 176 34.7
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 5.6e-11 72.4 214 31.8
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.6e-10 70.9 172 34.3
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 2.1e-10 70.5 193 33.2
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.1e-10 70.5 226 31.0
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 2.8e-10 70.1 256 30.9
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.8e-10 70.1 198 33.8
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 3.6e-10 69.7 234 31.6
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 4.7e-10 69.3 197 31.0
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 4.7e-10 69.3 245 31.4
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 6.2e-10 68.9 193 30.6
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 6.2e-10 68.9 184 33.2
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 6.2e-10 68.9 185 33.0
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 6.2e-10 68.9 156 32.1
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 8.1e-10 68.6 145 34.5
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 1.1e-09 68.2 157 28.7
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 1.1e-09 68.2 164 29.3
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 1.4e-09 67.8 179 29.6
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 1.4e-09 67.8 195 29.7
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.4e-09 67.0 224 31.7
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.4e-09 67.0 261 27.2
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 2.4e-09 67.0 216 26.4
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 3.1e-09 66.6 234 32.1
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 3.1e-09 66.6 264 31.1
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 3.1e-09 66.6 264 31.1
Lj5A228T44 Lonicera japonica HOM05D003426 ORTHO05D007302 3.1e-09 66.6 142 33.8
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 4.0e-09 66.2 182 33.0
Dinv34960 Davidia involucrata HOM05D005220 ORTHO05D006082 4.0e-09 66.2 156 34.0
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 4.0e-09 66.2 168 33.3
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 5.2e-09 65.9 166 31.9
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 5.2e-09 65.9 177 33.3
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 5.2e-09 65.9 170 32.9
Glyma.18G265000 Glycine max HOM05D005220 ORTHO05D006082 9.0e-09 65.1 178 31.5
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 9.0e-09 65.1 191 32.5
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.2e-08 64.7 188 30.9
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.5e-08 64.3 195 30.8
MBI16_g09907_MAGBIO Magnolia biondii HOM05D005220 ORTHO05D006082 1.5e-08 64.3 178 30.3
CiPaw.04G057500 Carya illinoinensis HOM05D005220 ORTHO05D006082 2.0e-08 63.9 158 30.4
Dinv24138 Davidia involucrata HOM05D000650 ORTHO05D007302 2.0e-08 63.9 169 28.4
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.0e-08 63.9 184 32.6
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 2.0e-08 63.9 225 28.9
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 2.0e-08 63.9 218 30.3
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 2.6e-08 63.5 210 31.0
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 2.6e-08 63.5 197 31.5
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 2.6e-08 63.5 201 30.3
Manes.01G098100 Manihot esculenta HOM05D005220 ORTHO05D006082 2.6e-08 63.5 167 30.5
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 2.6e-08 63.5 168 32.1
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 3.4e-08 63.2 173 30.6
Lju41C5T5 Lonicera japonica HOM05D005220 ORTHO05D006082 3.4e-08 63.2 172 30.8
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 3.4e-08 63.2 176 31.2
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 3.4e-08 63.2 147 33.3
ATR0064G106 Amborella trichopoda HOM05D005220 ORTHO05D006082 5.8e-08 62.4 159 31.4
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 9.9e-08 61.6 177 30.5
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 9.9e-08 61.6 175 30.9
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 9.9e-08 61.6 176 29.0
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.3e-07 61.2 191 29.3
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 1.7e-07 60.8 175 32.6
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 1.7e-07 60.8 156 30.1
Lj5A228T42 Lonicera japonica HOM05D000650 ORTHO05D007302 2.9e-07 60.1 153 31.4
Lj1g0008070 Lotus japonicus HOM05D005220 ORTHO05D006082 2.9e-07 60.1 176 32.4
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.9e-07 60.1 243 30.0
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.9e-07 60.1 242 28.1
TWI59G0327 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 2.9e-07 60.1 164 28.0
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 2.9e-07 60.1 176 30.7
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 3.8e-07 59.7 167 32.3
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 3.8e-07 59.7 181 30.9
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.8e-07 59.7 145 33.8
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 3.8e-07 59.7 154 32.5
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.8e-07 59.7 175 29.7
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 4.9e-07 59.3 261 26.8
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 4.9e-07 59.3 147 29.9
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 4.9e-07 59.3 178 28.1
Nitab4.5_0004586g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 6.4e-07 58.9 176 28.4
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 8.4e-07 58.5 182 33.0
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 8.4e-07 58.5 151 31.8
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 1.1e-06 58.2 177 31.1
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 1.1e-06 58.2 174 29.3
Eucgr.I01975 Eucalyptus grandis HOM05D005220 ORTHO05D006082 1.1e-06 58.2 154 32.5
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.1e-06 58.2 187 30.5
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 1.1e-06 58.2 189 31.7
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 1.1e-06 58.2 197 27.4
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 1.4e-06 57.8 169 29.0
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.4e-06 57.8 188 31.9
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.4e-06 57.8 159 34.6
AUR62008499 Chenopodium quinoa HOM05D005220 ORTHO05D006082 1.9e-06 57.4 163 33.1
Duzib132G0086 Durio zibethinus HOM05D000650 ORTHO05D007302 1.9e-06 57.4 148 29.7
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 1.9e-06 57.4 195 25.6
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.9e-06 57.4 192 29.7
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 2.4e-06 57.0 178 33.1
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 2.4e-06 57.0 169 30.2
Thhalv10003587m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 3.2e-06 56.6 191 33.5
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 3.2e-06 56.6 169 26.0
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.2e-06 56.6 188 28.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 4.2e-06 56.2 235 29.4
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 4.2e-06 56.2 208 30.3
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 4.2e-06 56.2 192 27.1
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 4.2e-06 56.2 175 30.3
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.2e-06 56.2 192 28.6
Sopen10g018090 Solanum pennellii HOM05D000650 ORTHO05D007302 4.2e-06 56.2 157 31.8
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 4.2e-06 56.2 173 27.7
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 4.2e-06 56.2 158 27.8
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 5.4e-06 55.8 190 30.5
arahy.Tifrunner.gnm1.ann1.8S7SHD Arachis hypogaea HOM05D005220 ORTHO05D006082 5.4e-06 55.8 162 32.1
arahy.Tifrunner.gnm1.ann1.XVT01H Arachis hypogaea HOM05D005220 ORTHO05D006082 5.4e-06 55.8 162 32.1
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 7.1e-06 55.5 169 29.6
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 7.1e-06 55.5 216 28.2
Sc04g0003090 Simmondsia chinensis HOM05D005220 ORTHO05D006082 7.1e-06 55.5 148 31.1
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.1e-06 55.5 193 29.0
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.1e-06 55.5 176 29.0
TAR381G0504 Trochodendron aralioides HOM05D000650 ORTHO05D000735 7.1e-06 55.5 151 31.8
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 7.1e-06 55.5 150 30.7
vmacro18154 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 7.1e-06 55.5 163 31.3
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 9.3e-06 55.1 196 31.1
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 9.3e-06 55.1 164 28.7
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 9.3e-06 55.1 178 32.6
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 9.3e-06 55.1 156 28.8
Sc10g0003210 Simmondsia chinensis HOM05D005220 ORTHO05D006082 9.3e-06 55.1 157 26.8
Solyc10g047670.2 Solanum lycopersicum HOM05D000650 ORTHO05D007302 9.3e-06 55.1 180 28.9


User provided reference genes

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