Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 3.7e-100 368.2 187 100.0
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.5e-24 117.1 194 41.8
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 3.3e-24 115.9 184 41.3
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 3.6e-23 112.5 185 40.5
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 4.7e-23 112.1 187 43.9
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 4.7e-23 112.1 187 38.0
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 1.1e-22 110.9 186 38.2
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 1.8e-22 110.2 188 41.0
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 1.8e-22 110.2 188 41.5
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 1.5e-21 107.1 188 38.8
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 3.4e-21 105.9 188 38.8
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 5.8e-21 105.1 188 40.4
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 1.7e-20 103.6 187 41.2
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 2.9e-20 102.8 189 41.3
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 3.7e-20 102.4 192 37.5
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 6.4e-20 101.7 184 39.1
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 3.2e-19 99.4 183 38.3
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 4.1e-19 99.0 187 35.8
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 5.4e-19 98.6 193 35.8
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 7.1e-19 98.2 186 37.6
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 1.2e-18 97.4 185 36.2
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.6e-18 97.1 185 36.8
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 2.1e-18 96.7 188 37.2
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 4.6e-18 95.5 185 34.1
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 4.6e-18 95.5 186 36.0
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 6.0e-18 95.1 184 39.1
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 7.8e-18 94.7 190 35.8
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 7.8e-18 94.7 185 37.8
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.0e-17 94.4 187 38.5
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 1.0e-17 94.4 186 37.6
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 1.3e-17 94.0 193 38.9
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 1.7e-17 93.6 186 36.6
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 1.7e-17 93.6 191 34.6
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 2.3e-17 93.2 187 38.5
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 2.3e-17 93.2 187 38.5
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 3.0e-17 92.8 182 35.2
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 3.0e-17 92.8 184 34.2
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 3.9e-17 92.4 185 33.0
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 3.9e-17 92.4 188 35.1
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 5.1e-17 92.0 196 37.8
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 6.6e-17 91.7 190 34.7
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 6.6e-17 91.7 202 35.1
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 6.6e-17 91.7 185 33.5
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 6.6e-17 91.7 184 38.0
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 8.6e-17 91.3 192 36.5
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 8.6e-17 91.3 187 36.4
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 8.6e-17 91.3 183 36.1
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 1.1e-16 90.9 185 35.7
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.1e-16 90.9 184 37.0
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 1.9e-16 90.1 187 33.2
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 1.9e-16 90.1 185 35.7
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 1.9e-16 90.1 193 36.3
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 1.9e-16 90.1 186 34.9
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 2.5e-16 89.7 185 37.3
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 2.5e-16 89.7 194 37.1
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 2.5e-16 89.7 188 34.6
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 3.3e-16 89.4 190 34.2
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 4.3e-16 89.0 184 35.3
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 4.3e-16 89.0 190 34.7
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 4.3e-16 89.0 190 34.7
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 4.3e-16 89.0 191 35.6
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 5.6e-16 88.6 188 35.6
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 5.6e-16 88.6 196 36.7
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 9.5e-16 87.8 190 31.6
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 9.5e-16 87.8 183 35.0
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 9.5e-16 87.8 190 35.3
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 9.5e-16 87.8 190 34.2
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 1.2e-15 87.4 186 38.2
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.2e-15 87.4 190 34.7
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.6e-15 87.0 183 33.3
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 1.6e-15 87.0 186 34.9
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 1.6e-15 87.0 194 36.6
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 2.8e-15 86.3 185 35.7
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 4.7e-15 85.5 189 34.9
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 4.7e-15 85.5 188 32.4
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 8.1e-15 84.7 195 33.3
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 1.1e-14 84.3 175 33.7
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.8e-14 83.6 196 35.2
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 2.3e-14 83.2 137 43.8
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 3.1e-14 82.8 189 33.9
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 3.1e-14 82.8 194 36.1
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 4.0e-14 82.4 190 31.6
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 5.2e-14 82.0 185 35.7
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 8.9e-14 81.3 182 34.1
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 8.9e-14 81.3 191 34.6
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 1.2e-13 80.9 185 36.2
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.2e-13 80.9 186 37.1
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 1.2e-13 80.9 186 32.8
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.5e-13 80.5 175 36.6
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 2.6e-13 79.7 191 32.5
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 4.4e-13 79.0 186 35.5
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 9.9e-13 77.8 182 33.5
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.3e-12 77.4 198 33.8
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.7e-12 77.0 168 34.5
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 2.2e-12 76.6 176 35.8
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 2.2e-12 76.6 190 34.7
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 2.9e-12 76.3 187 35.3
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 3.7e-12 75.9 185 36.2
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 3.7e-12 75.9 189 33.9
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 4.9e-12 75.5 187 32.1
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 4.9e-12 75.5 172 34.9
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 6.4e-12 75.1 182 31.9
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 6.4e-12 75.1 127 37.8
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 8.4e-12 74.7 185 35.1
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 8.4e-12 74.7 185 35.1
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 1.1e-11 74.3 188 31.9
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 1.1e-11 74.3 182 30.2
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 1.1e-11 74.3 176 35.2
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 1.9e-11 73.6 174 35.1
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 2.4e-11 73.2 184 32.1
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 4.1e-11 72.4 190 33.2
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 5.4e-11 72.0 192 30.7
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 7.1e-11 71.6 176 34.7
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 9.2e-11 71.2 190 30.5
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 9.2e-11 71.2 137 38.0
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.2e-10 70.9 149 34.9
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 2.7e-10 69.7 188 34.6
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.7e-09 67.0 188 29.8


User provided reference genes

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