Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 6.7e-274 946.8 504 100.0
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 2.1e-166 589.7 511 64.2
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.8e-157 560.1 510 60.6
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.1e-156 557.4 522 60.0
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 3.1e-154 549.3 508 59.8
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 3.1e-154 549.3 512 60.0
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.2e-153 547.4 513 59.6
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 2.0e-153 546.6 527 58.8
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 7.7e-153 544.7 511 59.1
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.2e-152 543.1 517 59.6
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 2.9e-152 542.7 516 59.1
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 2.9e-152 542.7 506 58.9
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.1e-151 540.8 511 58.9
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 9.4e-151 537.7 507 58.4
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 3.6e-150 535.8 513 59.6
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 7.9e-150 534.6 517 57.4
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 7.9e-150 534.6 510 58.6
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 1.0e-149 534.3 511 58.3
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.4e-149 533.9 508 59.3
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.3e-149 533.1 514 58.4
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.3e-149 533.1 514 58.4
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 2.3e-149 533.1 501 58.9
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 2.6e-148 529.6 510 58.6
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 4.4e-148 528.9 517 57.3
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 5.7e-148 528.5 510 57.5
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 5.7e-148 528.5 514 58.0
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 7.4e-148 528.1 509 58.3
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.3e-147 527.3 516 58.1
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 2.8e-147 526.2 519 59.0
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 6.3e-147 525.0 512 57.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.8e-146 523.5 509 58.3
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 1.8e-146 523.5 516 57.8
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 2.4e-146 523.1 513 58.3
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 2.4e-146 523.1 503 58.3
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 7.0e-146 521.5 513 58.3
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 9.1e-146 521.2 508 56.7
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 4.5e-145 518.8 508 57.3
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 5.9e-145 518.5 511 56.8
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 5.9e-145 518.5 531 55.6
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 7.7e-145 518.1 511 56.6
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.7e-144 516.9 515 57.1
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.5e-143 513.8 511 56.8
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 2.5e-143 513.1 507 56.6
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.5e-143 513.1 510 56.1
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 9.4e-143 511.1 508 57.1
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 9.4e-143 511.1 509 56.0
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.2e-142 510.8 510 55.7
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 4.7e-142 508.8 508 56.9
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 6.1e-142 508.4 507 56.6
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 8.8e-141 504.6 511 56.0
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 4.4e-140 502.3 514 56.0
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 5.7e-140 501.9 509 56.4
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 9.7e-140 501.1 513 56.5
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.7e-139 500.4 559 53.0
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.7e-139 500.4 513 56.9
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 2.8e-139 499.6 512 55.3
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 6.3e-139 498.4 518 56.2
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 3.1e-138 496.1 530 53.8
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.6e-137 493.8 511 55.6
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 2.7e-137 493.0 511 54.0
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 4.5e-137 492.3 509 55.2
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.0e-136 491.1 509 54.0
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.5e-135 487.3 509 55.0
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.9e-135 486.9 500 55.8
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 2.5e-135 486.5 535 52.9
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 1.6e-134 483.8 518 52.9
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 2.7e-134 483.0 517 53.6
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.6e-134 482.6 511 54.4
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 6.1e-134 481.9 520 53.7
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 5.2e-133 478.8 511 53.8
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.2e-132 477.6 528 52.8
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.2e-132 477.6 516 53.3
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 4.4e-132 475.7 511 54.2
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 4.8e-131 472.2 525 51.6
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 2.4e-130 469.9 525 53.1
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 4.1e-130 469.2 515 52.6
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.6e-129 467.2 526 52.3
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 2.0e-129 466.8 520 53.8
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.0e-128 464.5 548 50.5
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.7e-128 463.8 535 51.0
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.2e-127 459.5 518 53.3
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.0e-125 454.5 510 52.4
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.8e-125 453.8 532 51.5
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 2.6e-124 449.9 523 50.9
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.1e-122 444.5 410 56.3
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 4.1e-122 442.6 527 51.6
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 4.5e-121 439.1 520 51.7
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 5.9e-121 438.7 520 51.5
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 5.9e-121 438.7 361 61.8
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.7e-120 437.2 517 50.3
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.0e-117 426.4 504 50.2
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 2.9e-115 419.9 509 49.7
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 1.4e-106 391.0 511 48.5
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 4.3e-103 379.4 524 43.9
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 4.0e-101 372.9 531 43.5
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 3.2e-98 363.2 369 57.5
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 2.1e-97 360.5 374 57.2
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.8e-93 347.4 508 43.7
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 9.9e-92 341.7 345 58.8
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 2.3e-80 303.9 584 37.7
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 2.6e-68 263.8 360 48.3
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 6.0e-65 252.7 197 65.0
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 4.5e-60 236.5 372 43.0
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.2e-57 228.4 569 32.7
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.1e-37 162.2 330 38.5
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 3.4e-36 157.1 201 50.7
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 4.2e-34 150.2 144 49.3
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 7.7e-28 129.4 350 34.3
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 9.4e-26 122.5 110 56.4
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 7.2e-18 96.3 147 38.1
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 1.3e-06 58.9 49 59.2
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 3.7e-06 57.4 53 52.8
CAN.G518.8 Capsicum annuum HOM05D004574 ORTHO05D005612 6.3e-06 56.6 67 46.3
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 6.3e-06 56.6 59 49.2
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 8.3e-06 56.2 49 55.1


User provided reference genes

Program Settings