Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 6.5e-309 1063.1 513 100.0
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 1.3e-168 597.0 469 63.8
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 6.6e-168 594.7 463 61.3
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.0e-160 570.9 465 59.1
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 1.1e-146 524.2 441 57.8
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 6.0e-129 465.3 404 59.2
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 5.5e-122 442.2 441 51.7
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 7.6e-116 421.8 490 46.7
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 1.1e-109 401.4 291 64.6
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 2.9e-107 393.3 283 65.4
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 5.5e-106 389.0 284 64.1
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 1.6e-105 387.5 314 59.6
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 1.4e-104 384.4 284 63.4
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 2.3e-104 383.6 284 61.6
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 2.3e-104 383.6 325 56.6
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 1.1e-103 381.3 317 57.4
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.5e-103 380.9 280 62.1
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 9.7e-103 378.3 299 60.5
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 1.3e-102 377.9 285 61.4
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 2.2e-102 377.1 323 55.7
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 3.7e-102 376.3 291 61.5
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 3.1e-101 373.2 244 68.9
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 4.1e-101 372.9 287 61.7
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 6.9e-101 372.1 298 59.1
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 2.6e-100 370.2 291 61.5
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 3.8e-99 366.3 240 68.8
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 5.0e-99 365.9 281 61.2
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 5.0e-99 365.9 281 62.3
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 1.9e-98 364.0 287 61.0
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 4.2e-98 362.8 291 59.5
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 6.1e-97 359.0 250 66.0
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 6.1e-97 359.0 329 54.4
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 6.7e-96 355.5 278 60.8
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 1.7e-94 350.9 300 58.3
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 2.0e-92 344.0 348 50.3
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 1.3e-91 341.3 244 64.8
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 4.4e-87 326.2 243 64.6
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 2.4e-85 320.5 216 67.6
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 2.7e-84 317.0 323 50.8
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 3.8e-83 313.2 207 69.1
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 3.6e-81 306.6 254 57.5
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 4.1e-77 293.1 296 51.0
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 4.5e-76 289.7 278 52.5
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 8.5e-75 285.4 257 56.4
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 4.7e-73 279.6 231 60.2
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 2.0e-63 247.7 193 60.6
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 2.0e-63 247.7 221 54.3
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 3.4e-63 246.9 245 52.7
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 1.6e-60 238.0 221 51.6
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 7.0e-53 212.6 158 63.9
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 4.4e-47 193.4 238 45.8
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 9.5e-42 175.6 145 56.6
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 5.2e-40 169.9 110 69.1
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 8.9e-40 169.1 124 65.3
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.1e-32 145.6 131 52.7
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 4.6e-28 130.2 93 64.5
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 6.0e-28 129.8 95 64.2
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 1.7e-27 128.3 80 66.2
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 3.9e-27 127.1 273 34.8
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 4.3e-26 123.6 70 78.6
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.1e-24 119.0 119 47.1
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 2.6e-23 114.4 94 54.3
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 1.1e-21 109.0 103 53.4
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 2.5e-18 97.8 69 63.8
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 1.5e-15 88.6 50 74.0
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 3.8e-14 84.0 72 54.2
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 2.2e-06 58.2 62 48.4


User provided reference genes

Program Settings