Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G052 Amborella trichopoda HOM05D004228 ORTHO05D005137 0.0e+00 1524.6 765 100.0
ATR0789G048 Amborella trichopoda HOM05D004228 ORTHO05D005137 0.0e+00 1086.2 750 71.5
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 5.5e-304 1047.3 747 69.1
Nn8g40122 Nelumbo nucifera HOM05D004228 ORTHO05D005137 1.5e-301 1039.3 747 68.3
GSVIVG01016092001 Vitis vinifera HOM05D004228 ORTHO05D005137 2.7e-298 1028.5 727 68.9
Aqoxy7G02340 Aquilegia oxysepala HOM05D004228 ORTHO05D005137 3.7e-292 1008.1 742 66.7
CSS0026873 Camellia sinensis var. sinensis HOM05D004228 ORTHO05D005137 1.1e-291 1006.5 746 66.8
Prupe.3G104700 Prunus persica HOM05D004228 ORTHO05D005137 1.4e-291 1006.1 747 66.4
Actinidia25487 Actinidia chinensis HOM05D004228 ORTHO05D005137 3.5e-290 1001.5 745 66.2
Dinv21435 Davidia involucrata HOM05D004228 ORTHO05D005137 4.5e-290 1001.1 745 66.8
PSO170G5168 Papaver somniferum HOM05D004228 ORTHO05D005137 4.5e-290 1001.1 747 65.7
Ciclev10024933m.g Citrus clementina HOM05D004228 ORTHO05D005137 1.0e-289 1000.0 747 66.0
FvH4_6g28160 Fragaria vesca HOM05D004228 ORTHO05D005137 2.3e-289 998.8 745 65.9
FAN14G1073 Fragaria x ananassa HOM05D004228 ORTHO05D005137 8.6e-289 996.9 745 65.8
Sopen08g024020 Solanum pennellii HOM05D004228 ORTHO05D005137 2.5e-288 995.3 743 65.5
FAN09G0969 Fragaria x ananassa HOM05D004228 ORTHO05D005137 4.3e-288 994.6 745 65.6
Solyc08g075390.4 Solanum lycopersicum HOM05D004228 ORTHO05D005137 4.3e-288 994.6 743 65.7
Ca_13679_v3 Cicer arietinum L. HOM05D004228 ORTHO05D005137 5.6e-288 994.2 738 65.9
RcHm_v2.0_Chr2g0132121 Rosa chinensis HOM05D004228 ORTHO05D005137 5.6e-288 994.2 745 65.9
Rhsim08G0202500 Rhododendron simsii HOM05D004228 ORTHO05D005137 2.8e-287 991.9 785 62.4
MSTRG.13911 Avicennia marina HOM05D004228 ORTHO05D005137 4.7e-287 991.1 740 65.7
CiPaw.02G164000 Carya illinoinensis HOM05D004228 ORTHO05D005137 4.7e-287 991.1 745 66.3
Atru.chr1.2817 Acer truncatum HOM05D004228 ORTHO05D005137 2.3e-286 988.8 749 65.8
HPP92_017167 Vanilla planifolia HOM05D004228 ORTHO05D005137 3.1e-286 988.4 749 64.6
CAN.G930.1 Capsicum annuum HOM05D004228 ORTHO05D005137 6.8e-286 987.3 741 64.9
Lj6g0018144 Lotus japonicus HOM05D004228 ORTHO05D005137 6.8e-286 987.3 738 66.8
Psat4g022640 Pisum sativum HOM05D004228 ORTHO05D005137 8.9e-286 986.9 738 65.7
Glyma.13G072500 Glycine max HOM05D004228 ORTHO05D005137 1.2e-285 986.5 737 65.8
Os02g0793300 Oryza sativa ssp. japonica HOM05D004228 ORTHO05D005137 3.7e-284 981.5 741 64.9
THA.LOC104813593 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 4.9e-284 981.1 746 65.4
Lalb_Chr18g0048351 Lupinus albus HOM05D004228 ORTHO05D005137 6.4e-284 980.7 738 65.2
Potri.003G185600 Populus trichocarpa HOM05D004228 ORTHO05D005137 6.4e-284 980.7 743 65.1
Cc08_g05800 Coffea canephora HOM05D004228 ORTHO05D005137 8.3e-284 980.3 743 64.7
Zm00001eb192570 Zea mays HOM05D004228 ORTHO05D005137 8.3e-284 980.3 740 64.9
Thecc.06G048200 Theobroma cacao HOM05D004228 ORTHO05D005137 1.9e-283 979.2 745 64.8
Migut.E01375 Erythranthe guttata HOM05D004228 ORTHO05D005137 2.4e-283 978.8 743 64.6
Potri.003G185951 Populus trichocarpa HOM05D004228 ORTHO05D005137 3.2e-283 978.4 743 65.0
CANSAT64G2586 Cannabis sativa HOM05D004228 ORTHO05D005137 7.0e-283 977.2 754 64.7
Potri.003G185776 Populus trichocarpa HOM05D004228 ORTHO05D005137 9.2e-283 976.9 743 64.9
Phvul.006G018900 Phaseolus vulgaris HOM05D004228 ORTHO05D005137 1.2e-282 976.5 737 65.3
TWI12G1267 Tripterygium wilfordii HOM05D004228 ORTHO05D005137 2.0e-282 975.7 743 64.2
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 3.5e-282 974.9 735 64.2
HanXRQChr13g0411161 Helianthus annuus HOM05D004228 ORTHO05D005137 3.5e-282 974.9 731 65.0
arahy.Tifrunner.gnm1.ann1.1BZV33 Arachis hypogaea HOM05D004228 ORTHO05D005137 1.0e-281 973.4 723 66.0
BraA07t30343Z Brassica rapa HOM05D004228 ORTHO05D005137 5.0e-281 971.1 746 63.9
Thhalv10018131m.g Eutrema salsugineum HOM05D004228 ORTHO05D005137 5.0e-281 971.1 739 64.3
Carub.0002s2655 Capsella rubella HOM05D004228 ORTHO05D005137 2.5e-280 968.8 741 64.1
Sed0017026 Sechium edule HOM05D004228 ORTHO05D005137 2.5e-280 968.8 745 64.2
A07p26990 Brassica napus HOM05D004228 ORTHO05D005137 5.6e-280 967.6 746 63.9
C06p29710 Brassica napus HOM05D004228 ORTHO05D005137 7.3e-280 967.2 746 63.8
BolC6t38132H Brassica oleracea HOM05D004228 ORTHO05D005137 7.3e-280 967.2 746 63.5
DCAR_030908 Daucus carota HOM05D004228 ORTHO05D005137 7.3e-280 967.2 742 63.5
AT1G79690 Arabidopsis thaliana HOM05D004228 ORTHO05D005137 1.2e-279 966.5 744 63.4
BcaB02g07234 Brassica carinata HOM05D004228 ORTHO05D005137 2.8e-279 965.3 746 63.5
BcaNung04171 Brassica carinata HOM05D004228 ORTHO05D005137 4.7e-279 964.5 746 63.3
Ah.09g231750 Amaranthus hybridus HOM05D004228 ORTHO05D005137 1.8e-278 962.6 738 65.0
Duzib160G0712 Durio zibethinus HOM05D004228 ORTHO05D005137 2.3e-278 962.2 745 63.6
VMungo0540G0565 Vigna mungo HOM05D004228 ORTHO05D005137 2.3e-278 962.2 737 64.0
AL2G40390 Arabidopsis lyrata HOM05D004228 ORTHO05D005137 5.2e-278 961.1 744 63.0
Aa31LG4G1300 Aethionema arabicum HOM05D004228 ORTHO05D005137 6.8e-278 960.7 733 64.4
C06p53520 Brassica napus HOM05D004228 ORTHO05D005137 2.0e-277 959.1 767 61.5
Sp5g34750 Schrenkiella parvula HOM05D004228 ORTHO05D005137 7.5e-277 957.2 746 62.9
EL10Ac8g19421 Beta vulgaris HOM05D004228 ORTHO05D005137 9.8e-277 956.8 740 64.3
CARHR073460 Cardamine hirsuta HOM05D004228 ORTHO05D005137 1.3e-276 956.4 746 62.5
HanXRQChr17g0558091 Helianthus annuus HOM05D004228 ORTHO05D005137 4.9e-276 954.5 727 64.0
Lsat_1_v5_gn_3_53241 Lactuca sativa HOM05D004228 ORTHO05D005137 1.9e-275 952.6 740 63.4
MELO3C023478.2 Cucumis melo HOM05D004228 ORTHO05D005137 3.2e-275 951.8 747 63.6
BcaC08g47528 Brassica carinata HOM05D004228 ORTHO05D005137 4.1e-275 951.4 741 63.3
Sabra03G0135800 Salix brachista HOM05D004228 ORTHO05D005137 9.2e-275 950.3 799 61.1
CsaV3_7G031780 Cucumis sativus L. HOM05D004228 ORTHO05D005137 2.1e-274 949.1 746 63.8
THA.LOC104808168 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 2.7e-274 948.7 736 65.2
Gohir.A10G000600 Gossypium hirsutum HOM05D004228 ORTHO05D005137 3.5e-274 948.3 741 63.4
ClCG09G003440 Citrullus lanatus HOM05D004228 ORTHO05D005137 7.8e-274 947.2 753 62.8
Gorai.011G001100 Gossypium raimondii HOM05D004228 ORTHO05D005137 2.3e-273 945.7 742 63.3
BolC6t40368H Brassica oleracea HOM05D004228 ORTHO05D005137 3.9e-273 944.9 767 61.0
Gohir.D10G000700 Gossypium hirsutum HOM05D004228 ORTHO05D005137 3.9e-273 944.9 741 63.2
Haze_16698 Corylus avellana HOM05D004228 ORTHO05D005137 8.6e-273 943.7 854 57.5
ECA240G2553 Erigeron canadensis HOM05D004228 ORTHO05D005137 8.6e-273 943.7 751 62.1
BraA07t31978Z Brassica rapa HOM05D004228 ORTHO05D005137 1.1e-272 943.3 739 62.9
MELO3C023479.2 Cucumis melo HOM05D004228 ORTHO05D005137 1.5e-272 943.0 729 64.3
CsaV3_7G031770 Cucumis sativus L. HOM05D004228 ORTHO05D005137 2.5e-272 942.2 731 64.2
BcaB02g08706 Brassica carinata HOM05D004228 ORTHO05D005137 4.7e-271 937.9 746 62.3
MELO3C023481.2 Cucumis melo HOM05D004228 ORTHO05D005137 4.7e-271 937.9 753 61.0
A07p44700 Brassica napus HOM05D004228 ORTHO05D005137 1.4e-270 936.4 744 62.5
AUR62002649 Chenopodium quinoa HOM05D004228 ORTHO05D005137 1.4e-270 936.4 750 62.9
VMungo1080G1878 Vigna mungo HOM05D004228 ORTHO05D005137 1.8e-270 936.0 734 63.1
ECA240G4106 Erigeron canadensis HOM05D004228 ORTHO05D005137 8.9e-270 933.7 725 63.6
Lsat_1_v5_gn_6_17241 Lactuca sativa HOM05D004228 ORTHO05D005137 5.8e-269 931.0 735 62.7
DCAR_002193 Daucus carota HOM05D004228 ORTHO05D005137 1.7e-268 929.5 741 62.3
Medtr3g437740 Medicago truncatula HOM05D004228 ORTHO05D005137 4.0e-262 908.3 688 65.1
SGA_v2.0_scaffold121G33058 Striga asiatica HOM05D004228 ORTHO05D005137 8.9e-262 907.1 714 64.1
Mapoly0059s0059 Marchantia polymorpha HOM05D004228 ORTHO05D005137 2.6e-261 905.6 721 62.6
arahy.Tifrunner.gnm1.ann1.GHRN5T Arachis hypogaea HOM05D004228 ORTHO05D005137 7.6e-261 904.0 722 62.6
vmacro19079 Vaccinium macrocarpon HOM05D004228 ORTHO05D005137 9.3e-259 897.1 749 60.9
Eucgr.J03134 Eucalyptus grandis HOM05D004228 ORTHO05D005137 4.8e-255 884.8 665 65.9
Peaxi162Scf00193g00726 Petunia axillaris HOM05D004228 ORTHO05D005137 1.1e-254 883.6 728 61.8
Actinidia18265 Actinidia chinensis HOM05D004228 ORTHO05D005137 1.3e-252 876.7 650 65.8
Pp3c5_190 Physcomitrium patens HOM05D004228 ORTHO05D005137 6.4e-252 874.4 732 59.8
SMO337G0028 Selaginella moellendorffii HOM05D004228 ORTHO05D005137 8.4e-252 874.0 725 58.3
arahy.Tifrunner.gnm1.ann1.XEX8KQ Arachis hypogaea HOM05D004228 ORTHO05D005137 2.4e-251 872.5 735 60.5
unitig_37.g12907 Utricularia gibba HOM05D004228 ORTHO05D005137 1.1e-246 857.1 740 58.2
FAN02G0630 Fragaria x ananassa HOM05D004228 ORTHO05D005137 4.9e-244 848.2 691 61.9
MD17G1227300 Malus domestica HOM05D004228 ORTHO05D005137 8.7e-233 810.8 729 57.6
Nitab4.5_0000030g0500 Nicotiana tabacum HOM05D004228 ORTHO05D005137 2.5e-232 809.3 655 62.4
Nitab4.5_0002244g0120 Nicotiana tabacum HOM05D004228 ORTHO05D005137 2.5e-232 809.3 629 64.5
AagrBONN_evm.TU.Sc2ySwM_117.2286 Anthoceros agrestis HOM05D004228 ORTHO05D005137 4.1e-230 802.0 657 59.8
Lsat_1_v5_gn_0_21260 Lactuca sativa HOM05D004228 ORTHO05D005137 1.8e-209 733.4 607 60.3
Manes.11G069700 Manihot esculenta HOM05D004228 ORTHO05D005137 5.1e-209 731.9 551 66.6
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 5.7e-208 728.4 563 62.3
Lsat_1_v5_gn_0_21180 Lactuca sativa HOM05D004228 ORTHO05D005137 5.3e-206 721.8 638 57.5
AUR62034058 Chenopodium quinoa HOM05D004228 ORTHO05D005137 1.9e-179 633.6 710 50.0
Hma1.2p1_0338F.1_g129690 Hydrangea macrophylla HOM05D004228 ORTHO05D005137 3.9e-172 609.4 482 62.2
Oeu057157.1 Olea europaea HOM05D004228 ORTHO05D005137 2.9e-167 593.2 439 67.2
arahy.Tifrunner.gnm1.ann1.W5V7W0 Arachis hypogaea HOM05D004228 ORTHO05D005137 4.3e-147 526.2 411 63.3
MBI14_g16439_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 1.8e-137 494.2 583 47.7
PSO017G5477 Papaver somniferum HOM05D004228 ORTHO05D005137 2.0e-136 490.7 373 66.0
PSO017G2203 Papaver somniferum HOM05D004228 ORTHO05D005137 3.8e-119 433.3 323 63.8
SEGI_32687 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 8.4e-119 432.2 346 61.6
COL.COLO4_26790 Corchorus olitorius HOM05D004228 ORTHO05D005137 1.9e-102 377.9 272 67.6
Cpa.g.sc167.19 Carica papaya HOM05D004228 ORTHO05D005137 1.5e-83 315.1 248 63.3
Lsat_1_v5_gn_3_49001 Lactuca sativa HOM05D004228 ORTHO05D005137 1.8e-73 281.6 244 55.3
MD09G1228800 Malus domestica HOM05D004228 ORTHO05D005137 6.1e-61 240.0 266 48.5
RcHm_v2.0_Chr2g0132171 Rosa chinensis HOM05D004228 ORTHO05D005137 2.0e-59 235.0 260 51.9
MD00G1188200 Malus domestica HOM05D004228 ORTHO05D005137 1.0e-55 222.6 252 48.4
Lsat_1_v5_gn_6_87921 Lactuca sativa HOM05D004228 ORTHO05D005137 6.8e-52 209.9 213 54.9
MBI14_g16438_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 7.5e-51 206.5 160 61.2
COL.COLO4_26791 Corchorus olitorius HOM05D004228 ORTHO05D005137 3.7e-50 204.1 305 40.7
CBR_g49132 Chara braunii HOM05D004228 ORTHO05D005137 5.0e-47 193.7 148 64.9
CBR_g49119 Chara braunii HOM05D004228 ORTHO05D005137 1.5e-46 192.2 218 45.4
SEGI_17966 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 1.2e-40 172.6 119 71.4
CBR_g49120 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-40 171.0 203 45.8
Cfa001845 Carpinus fangiana HOM05D004228 ORTHO05D005137 2.1e-37 161.8 117 71.8
Gorai.007G245800 Gossypium raimondii HOM05D004228 ORTHO05D005137 3.6e-37 161.0 130 59.2
Glyma.20G046501 Glycine max HOM05D004228 ORTHO05D005137 6.8e-36 156.8 156 50.0
Gorai.008G198300 Gossypium raimondii HOM05D004228 ORTHO05D005137 9.9e-35 152.9 112 64.3
SEGI_21553 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 9.9e-35 152.9 97 73.2
Gohir.D12G184901 Gossypium hirsutum HOM05D004228 ORTHO05D005137 7.1e-33 146.7 112 62.5
CBR_g49131 Chara braunii HOM05D007088 ORTHO05D008477 1.1e-30 139.4 95 65.3
Glyma.20G046401 Glycine max HOM05D004228 ORTHO05D005137 2.4e-28 131.7 91 71.4
CDE02G2004 Ceratophyllum demersum HOM05D004228 ORTHO05D005137 6.4e-26 123.6 95 64.2
Gorai.006G048700 Gossypium raimondii HOM05D004228 ORTHO05D005137 5.4e-25 120.6 79 65.8
Nitab4.5_0000030g0490 Nicotiana tabacum HOM05D004228 ORTHO05D005137 9.3e-25 119.8 81 64.2
Oeu057158.1 Olea europaea HOM05D004228 ORTHO05D005137 9.3e-25 119.8 79 67.1
FAN02G0140 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.2e-24 119.4 79 64.6
MD09G1229100 Malus domestica HOM05D004228 ORTHO05D005137 1.6e-24 119.0 79 65.8
SEGI_04747 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 2.1e-24 118.6 79 63.3
Nitab4.5_0002244g0110 Nicotiana tabacum HOM05D004228 ORTHO05D005137 2.7e-24 118.2 81 64.2
Gohir.A06G076350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.1e-17 96.3 60 68.3
Gohir.D02G099801 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.1e-17 96.3 60 68.3
Gohir.A07G034550 Gossypium hirsutum HOM05D004228 ORTHO05D005137 2.4e-17 95.1 60 66.7
Gohir.A05G304350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 7.1e-17 93.6 56 69.6
MD00G1188000 Malus domestica HOM05D004228 ORTHO05D005137 3.5e-16 91.3 66 62.1
Gohir.D13G121066 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.3e-15 89.4 54 70.4
Gorai.002G214900 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.3e-15 89.4 54 70.4
Lsat_1_v5_gn_5_149700 Lactuca sativa HOM05D004228 ORTHO05D016156 7.4e-14 83.6 86 54.7
SEGI_15998 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 8.1e-13 80.1 71 50.7
Actinidia00024 Actinidia chinensis HOM05D000639 ORTHO05D019441 6.9e-12 77.0 97 44.3
MBI14_g16442_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 9.9e-11 73.2 45 80.0
Gohir.D09G001001 Gossypium hirsutum HOM05D004228 ORTHO05D005137 2.4e-09 68.6 188 29.8
Cpa.g.sc167.21 Carica papaya HOM05D004228 ORTHO05D043558 5.5e-09 67.4 37 70.3
MCO12G087 Micromonas commoda HOM05D004228 ORTHO05D005137 7.1e-09 67.0 134 29.9
Gorai.009G406300 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.2e-08 66.2 62 58.1
Lsat_1_v5_gn_4_114980 Lactuca sativa HOM05D004228 ORTHO05D005137 4.6e-08 64.3 74 47.3
Pp3c5_70 Physcomitrium patens HOM05D004228 ORTHO05D005137 6.0e-08 63.9 44 61.4


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