Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 1.7e-129 466.1 242 100.0
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 5.2e-22 109.0 215 33.5
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.2e-21 107.8 279 31.9
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 3.4e-21 106.3 215 34.9
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 4.8e-20 102.4 279 30.5
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.1e-19 101.3 279 30.1
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 2.4e-19 100.1 268 31.7
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 5.4e-19 99.0 295 30.5
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 5.4e-19 99.0 275 29.5
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 2.0e-18 97.1 228 33.8
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 2.7e-18 96.7 229 32.3
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 2.7e-18 96.7 199 36.2
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 1.7e-17 94.0 301 28.9
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 2.9e-17 93.2 242 33.1
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 6.5e-17 92.0 235 34.0
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 6.5e-17 92.0 274 32.5
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 1.9e-16 90.5 301 28.6
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 2.5e-16 90.1 320 26.9
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 3.2e-16 89.7 206 34.0
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 3.2e-16 89.7 307 27.4
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 4.2e-16 89.4 273 31.1
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 7.2e-16 88.6 257 30.4
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 7.2e-16 88.6 315 26.7
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 1.2e-15 87.8 275 30.5
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.2e-15 87.8 275 30.5
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.1e-15 87.0 275 29.1
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.1e-15 87.0 275 29.1
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 2.7e-15 86.7 310 27.7
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.7e-15 86.7 275 28.7
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 3.6e-15 86.3 308 28.2
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 3.6e-15 86.3 198 34.8
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 4.7e-15 85.9 233 28.8
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 4.7e-15 85.9 281 31.0
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 3.0e-14 83.2 316 25.9
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 4.0e-14 82.8 225 33.3
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 6.8e-14 82.0 280 28.9
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 8.8e-14 81.6 320 27.5
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 1.2e-13 81.3 314 27.4
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 1.2e-13 81.3 290 29.3
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 1.5e-13 80.9 244 31.6
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 1.5e-13 80.9 346 26.3
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 2.0e-13 80.5 322 26.7
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 2.0e-13 80.5 319 26.3
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 5.7e-13 79.0 318 27.0
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 5.7e-13 79.0 288 26.7
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 5.7e-13 79.0 310 28.1
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 5.7e-13 79.0 237 29.5
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 7.5e-13 78.6 259 28.2
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 7.5e-13 78.6 326 27.3
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.7e-12 77.4 289 26.0
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 2.2e-12 77.0 251 29.9
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 3.7e-12 76.3 166 36.1
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 8.3e-12 75.1 237 29.1
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.4e-11 74.3 331 25.7
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.8e-11 73.9 236 28.4
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.8e-11 73.9 255 26.7
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 1.8e-11 73.9 329 25.5
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.1e-11 73.2 255 28.6
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 5.4e-11 72.4 255 26.3
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 5.4e-11 72.4 349 24.9
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 1.2e-10 71.2 309 25.9
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 2.7e-10 70.1 321 25.2
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 3.5e-10 69.7 234 27.4
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 3.5e-10 69.7 234 27.4
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 5.9e-10 68.9 246 25.6
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 7.7e-10 68.6 162 36.4
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 1.0e-09 68.2 283 26.1
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 1.3e-09 67.8 279 25.4
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 2.3e-09 67.0 233 25.3
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 2.3e-09 67.0 233 25.3
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 2.3e-09 67.0 235 28.9
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 2.3e-09 67.0 276 26.1
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 3.8e-09 66.2 235 27.2
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 5.0e-09 65.9 246 24.8
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 8.6e-09 65.1 194 31.4
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 1.9e-08 63.9 281 26.3
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 3.3e-08 63.2 330 26.7
SMO367G0664 Selaginella moellendorffii HOM05D002166 ORTHO05D002374 3.3e-08 63.2 124 34.7
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 7.3e-08 62.0 180 29.4
MBI18_g36060_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 9.5e-08 61.6 126 35.7
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.2e-07 61.2 293 25.3
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 1.6e-07 60.8 324 26.2
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 1.6e-07 60.8 125 32.8
DCAR_016704 Daucus carota HOM05D002166 ORTHO05D002634 3.6e-07 59.7 153 31.4
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 3.6e-07 59.7 177 32.2
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 4.7e-07 59.3 205 29.3
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 4.7e-07 59.3 259 25.1
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 6.1e-07 58.9 279 25.1
MELO3C025366.2 Cucumis melo HOM05D002166 ORTHO05D002634 8.0e-07 58.5 127 31.5
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 1.4e-06 57.8 301 24.6
Nitab4.5_0000981g0080 Nicotiana tabacum HOM05D002166 ORTHO05D002634 1.8e-06 57.4 242 28.1
Sopen12g001020 Solanum pennellii HOM05D002166 ORTHO05D002634 1.8e-06 57.4 229 27.9
CAN.G1404.1 Capsicum annuum HOM05D002166 ORTHO05D002634 2.3e-06 57.0 181 30.9
Zm00001eb150970 Zea mays HOM05D002166 ORTHO05D002634 2.3e-06 57.0 177 31.1
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 3.0e-06 56.6 215 26.5
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 3.0e-06 56.6 313 25.6
PGSC0003DMG400027878 Solanum tuberosum HOM05D002166 ORTHO05D002634 3.0e-06 56.6 181 29.8
vmacro11726 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 3.0e-06 56.6 127 30.7
Prupe.4G212500 Prunus persica HOM05D002166 ORTHO05D002634 4.0e-06 56.2 125 32.0
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 5.2e-06 55.8 225 25.8
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 5.2e-06 55.8 314 25.2
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 5.2e-06 55.8 156 29.5
Peaxi162Scf01097g00414 Petunia axillaris HOM05D002166 ORTHO05D002634 5.2e-06 55.8 181 29.3
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 5.2e-06 55.8 247 26.7
TAR629G0586 Trochodendron aralioides HOM05D002166 ORTHO05D002634 5.2e-06 55.8 115 34.8
Gohir.A11G278700 Gossypium hirsutum HOM05D002166 ORTHO05D002634 6.8e-06 55.5 158 29.7
Nitab4.5_0006428g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 6.8e-06 55.5 242 27.3
Pp3c9_16460 Physcomitrium patens HOM05D002319 ORTHO05D002374 6.8e-06 55.5 122 33.6
arahy.Tifrunner.gnm1.ann1.R34EKV Arachis hypogaea HOM05D002166 ORTHO05D002634 8.9e-06 55.1 112 33.9
arahy.Tifrunner.gnm1.ann1.WSU996 Arachis hypogaea HOM05D002166 ORTHO05D002634 8.9e-06 55.1 112 33.9
Pp3c22_1560 Physcomitrium patens HOM05D002166 ORTHO05D002634 8.9e-06 55.1 122 33.6
RcHm_v2.0_Chr5g0047011 Rosa chinensis HOM05D002319 ORTHO05D002374 8.9e-06 55.1 214 25.7
Solyc07g064580.3 Solanum lycopersicum HOM05D002166 ORTHO05D002634 8.9e-06 55.1 188 29.3
Sopen07g032770 Solanum pennellii HOM05D002166 ORTHO05D002634 8.9e-06 55.1 188 29.3


User provided reference genes

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