Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0579G151 Amborella trichopoda HOM05D005160 ORTHO05D006127 1.5e-301 1038.9 591 100.0
TAR381G1224 Trochodendron aralioides HOM05D005160 ORTHO05D006127 6.8e-185 651.4 598 60.7
FvH4_2g01450 Fragaria vesca HOM05D005160 ORTHO05D006127 6.6e-172 608.2 590 58.8
FAN24G2272 Fragaria x ananassa HOM05D005160 ORTHO05D006127 6.6e-172 608.2 590 58.8
Nn5g30735 Nelumbo nucifera HOM05D005160 ORTHO05D006127 1.1e-171 607.4 600 58.7
CiPaw.05G080400 Carya illinoinensis HOM05D005160 ORTHO05D006127 3.6e-170 602.4 601 58.4
MBI09_g14140_MAGBIO Magnolia biondii HOM05D005160 ORTHO05D006127 3.6e-170 602.4 588 59.7
Aqoxy5G01804 Aquilegia oxysepala HOM05D005160 ORTHO05D006127 4.8e-170 602.1 590 59.3
RcHm_v2.0_Chr6g0244091 Rosa chinensis HOM05D005160 ORTHO05D006127 1.4e-169 600.5 589 59.1
Lj3g0012456 Lotus japonicus HOM05D005160 ORTHO05D006127 6.9e-169 598.2 581 57.3
Cfa005223 Carpinus fangiana HOM05D005160 ORTHO05D006127 1.5e-168 597.0 591 57.2
Potri.004G173600 Populus trichocarpa HOM05D005160 ORTHO05D006127 1.5e-168 597.0 598 56.9
FAN27G2227 Fragaria x ananassa HOM05D005160 ORTHO05D006127 2.0e-168 596.7 590 58.5
FAN20G0465 Fragaria x ananassa HOM05D005160 ORTHO05D006127 5.8e-168 595.1 590 58.5
Potri.009G132900 Populus trichocarpa HOM05D005160 ORTHO05D006127 7.6e-168 594.7 595 56.8
FAN15G3563 Fragaria x ananassa HOM05D005160 ORTHO05D006127 9.9e-168 594.3 590 58.3
Haze_02160 Corylus avellana HOM05D005160 ORTHO05D006127 1.7e-167 593.6 590 56.3
MD10G1123200 Malus domestica HOM05D005160 ORTHO05D006127 1.7e-167 593.6 593 58.7
GSVIVG01024045001 Vitis vinifera HOM05D005160 ORTHO05D006127 1.7e-167 593.6 591 58.4
Carub.0007s0051 Capsella rubella HOM05D005160 ORTHO05D006127 2.1e-165 586.6 580 57.4
Phvul.011G034500 Phaseolus vulgaris HOM05D005160 ORTHO05D006127 3.5e-165 585.9 579 57.2
Glyma.11G106500 Glycine max HOM05D005160 ORTHO05D006127 6.0e-165 585.1 540 59.8
AUR62010059 Chenopodium quinoa HOM05D005160 ORTHO05D006127 7.9e-165 584.7 584 57.2
AUR62013051 Chenopodium quinoa HOM05D005160 ORTHO05D006127 1.3e-164 583.9 587 56.0
Ca_19053_v3 Cicer arietinum L. HOM05D005160 ORTHO05D006127 1.3e-164 583.9 577 56.7
VMungo1127G1693 Vigna mungo HOM05D005160 ORTHO05D006127 1.3e-164 583.9 594 56.1
Thecc.02G062800 Theobroma cacao HOM05D005160 ORTHO05D006127 1.7e-164 583.6 599 55.8
CARHR294360 Cardamine hirsuta HOM05D005160 ORTHO05D006127 2.3e-164 583.2 581 57.5
Medtr4g073620 Medicago truncatula HOM05D005160 ORTHO05D006127 2.3e-164 583.2 584 55.8
Gohir.D01G157700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 3.0e-164 582.8 601 54.6
AL7G10530 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 3.9e-164 582.4 580 57.4
Gohir.A01G166700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 3.9e-164 582.4 601 55.6
PSO170G2472 Papaver somniferum HOM05D005160 ORTHO05D006127 5.1e-164 582.0 590 57.1
AT4G38640 Arabidopsis thaliana HOM05D005160 ORTHO05D006127 8.7e-164 581.3 580 57.2
Lalb_Chr03g0025091 Lupinus albus HOM05D005160 ORTHO05D006127 1.5e-163 580.5 579 57.3
Hma1.2p1_0163F.1_g072320 Hydrangea macrophylla HOM05D005160 ORTHO05D006127 1.9e-163 580.1 587 57.1
PSO700G0063 Papaver somniferum HOM05D005160 ORTHO05D006127 3.3e-163 579.3 592 57.1
CSS0048155 Camellia sinensis var. sinensis HOM05D005160 ORTHO05D006127 4.3e-163 578.9 595 55.6
MSTRG.16896 Avicennia marina HOM05D005160 ORTHO05D006127 9.6e-163 577.8 584 55.1
QL11p049938 Quercus lobata HOM05D005160 ORTHO05D006127 9.6e-163 577.8 618 54.7
EL10Ac9g21400 Beta vulgaris HOM05D005160 ORTHO05D006127 1.3e-162 577.4 582 55.8
Thecc.02G062500 Theobroma cacao HOM05D005160 ORTHO05D006127 1.3e-162 577.4 599 55.6
Gorai.002G195800 Gossypium raimondii HOM05D005160 ORTHO05D006127 3.6e-162 575.9 601 54.6
TWI31G1222 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 3.6e-162 575.9 581 56.5
Migut.B00095 Erythranthe guttata HOM05D005160 ORTHO05D006127 4.8e-162 575.5 592 55.1
Aa31LG6G16530 Aethionema arabicum HOM05D005160 ORTHO05D006127 6.2e-162 575.1 580 56.2
Hund06424 Selenicereus undatus HOM05D005160 ORTHO05D006127 6.2e-162 575.1 593 55.3
Peaxi162Scf00362g00839 Petunia axillaris HOM05D005160 ORTHO05D006127 8.1e-162 574.7 575 55.5
Psat7g175760 Pisum sativum HOM05D005160 ORTHO05D006127 8.1e-162 574.7 582 55.7
Sabra04G0115600 Salix brachista HOM05D005160 ORTHO05D006127 8.1e-162 574.7 578 57.3
Glyma.12G031600 Glycine max HOM05D005160 ORTHO05D006127 1.1e-161 574.3 590 55.9
Prupe.8G163700 Prunus persica HOM05D005160 ORTHO05D006127 1.1e-161 574.3 599 57.1
Thhalv10024826m.g Eutrema salsugineum HOM05D005160 ORTHO05D006127 2.4e-161 573.2 580 57.1
Ciclev10028126m.g Citrus clementina HOM05D005160 ORTHO05D006127 9.0e-161 571.2 598 55.5
CiPaw.06G123200 Carya illinoinensis HOM05D005160 ORTHO05D006127 1.5e-160 570.5 569 57.6
Duzib132G0556 Durio zibethinus HOM05D005160 ORTHO05D006127 1.5e-160 570.5 598 56.2
THA.LOC104824770 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 1.5e-160 570.5 579 55.1
Manes.04G073300 Manihot esculenta HOM05D005160 ORTHO05D006127 7.6e-160 568.2 602 54.3
MELO3C020808.2 Cucumis melo HOM05D005160 ORTHO05D006127 1.7e-159 567.0 583 54.5
Sp7g37140 Schrenkiella parvula HOM05D005160 ORTHO05D006127 2.9e-159 566.2 576 56.6
Sc08g0003030 Simmondsia chinensis HOM05D005160 ORTHO05D006127 1.9e-158 563.5 580 56.4
CsaV3_2G015970 Cucumis sativus L. HOM05D005160 ORTHO05D006127 3.2e-158 562.8 583 54.4
ClCG02G011810 Citrullus lanatus HOM05D005160 ORTHO05D006127 7.1e-158 561.6 585 53.3
Cc02_g16320 Coffea canephora HOM05D005160 ORTHO05D006127 9.3e-158 561.2 588 53.9
Sabra09G0103200 Salix brachista HOM05D005160 ORTHO05D006127 9.3e-158 561.2 588 55.3
Duzib052G1050 Durio zibethinus HOM05D005160 ORTHO05D006127 2.7e-157 559.7 578 56.1
vmacro02269 Vaccinium macrocarpon HOM05D005160 ORTHO05D006127 2.7e-157 559.7 623 53.9
SalBow1G7891 Salvia bowleyana HOM05D005160 ORTHO05D006127 3.5e-157 559.3 578 54.8
TWI75G0220 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 3.5e-157 559.3 586 54.8
Nitab4.5_0005837g0020 Nicotiana tabacum HOM05D005160 ORTHO05D006127 1.0e-156 557.8 579 54.7
Nitab4.5_0001891g0030 Nicotiana tabacum HOM05D005160 ORTHO05D006127 1.3e-156 557.4 579 54.7
THA.LOC104804092 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 1.3e-156 557.4 585 53.8
Dinv41951 Davidia involucrata HOM05D005160 ORTHO05D006127 8.7e-156 554.7 573 56.9
PGSC0003DMG402006199 Solanum tuberosum HOM05D005160 ORTHO05D006127 8.7e-156 554.7 559 56.5
Atru.chr5.3293 Acer truncatum HOM05D005160 ORTHO05D006127 3.3e-155 552.7 599 53.4
Rhsim11G0191300 Rhododendron simsii HOM05D005160 ORTHO05D006127 4.3e-155 552.4 598 53.3
MD05G1119500 Malus domestica HOM05D005160 ORTHO05D006127 5.6e-155 552.0 597 56.1
Solyc01g111370.3 Solanum lycopersicum HOM05D005160 ORTHO05D006127 9.6e-155 551.2 559 55.8
BcaB03g12216 Brassica carinata HOM05D005160 ORTHO05D006127 1.3e-154 550.8 581 54.9
Sopen01g053440 Solanum pennellii HOM05D005160 ORTHO05D006127 2.1e-154 550.1 558 55.9
CAN.G588.54 Capsicum annuum HOM05D005160 ORTHO05D006127 3.7e-154 549.3 558 55.2
BcaC01g00246 Brassica carinata HOM05D005160 ORTHO05D006127 4.8e-154 548.9 579 54.7
C03p77200 Brassica napus HOM05D005160 ORTHO05D006127 4.8e-154 548.9 580 54.8
SGA_v2.0_scaffold32G13272 Striga asiatica HOM05D005160 ORTHO05D006127 1.8e-153 547.0 583 53.5
Sed0006607 Sechium edule HOM05D005160 ORTHO05D006127 2.4e-153 546.6 581 53.7
A08p24110 Brassica napus HOM05D005160 ORTHO05D006127 3.1e-153 546.2 578 54.7
BolC3t19975H Brassica oleracea HOM05D005160 ORTHO05D006127 6.9e-153 545.0 580 54.3
Ah.01g022840 Amaranthus hybridus HOM05D005160 ORTHO05D006127 7.6e-152 541.6 590 52.7
Oeu014453.1 Olea europaea HOM05D005160 ORTHO05D006127 1.6e-149 533.9 607 51.9
Lsat_1_v5_gn_3_46280 Lactuca sativa HOM05D005160 ORTHO05D006127 6.0e-149 531.9 550 55.3
HanXRQChr17g0543921 Helianthus annuus HOM05D005160 ORTHO05D006127 1.3e-146 524.2 542 54.2
Eucgr.I01400 Eucalyptus grandis HOM05D005160 ORTHO05D006127 2.8e-146 523.1 502 58.2
DCAR_003159 Daucus carota HOM05D005160 ORTHO05D006127 8.2e-146 521.5 575 53.0
SGA_v2.0_scaffold58G20392 Striga asiatica HOM05D005160 ORTHO05D006127 2.4e-145 520.0 584 51.5
SEGI_02117 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 6.5e-143 511.9 574 51.6
TPR.G39261 Trifolium pratense HOM05D005160 ORTHO05D006127 5.9e-136 488.8 493 54.8
Actinidia20505 Actinidia chinensis HOM05D005160 ORTHO05D006127 2.7e-125 453.4 572 49.1
COL.COLO4_17310 Corchorus olitorius HOM05D005160 ORTHO05D006127 1.4e-116 424.5 331 68.6
Actinidia00615 Actinidia chinensis HOM05D005160 ORTHO05D006127 1.7e-106 391.0 550 46.2
Manes.11G095300 Manihot esculenta HOM05D005160 ORTHO05D006127 4.8e-106 389.4 436 51.4
CDE02G2386 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 6.3e-106 389.0 306 68.3
unitig_0.g42 Utricularia gibba HOM05D005160 ORTHO05D000138 2.7e-104 383.6 476 45.4
SMO012G0038 Selaginella moellendorffii HOM05D005160 ORTHO05D006127 5.9e-104 382.5 554 40.8
CDE04G1868 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 4.2e-102 376.3 298 68.8
Oeu006646.1 Olea europaea HOM05D005160 ORTHO05D006127 4.7e-101 372.9 448 52.9
ECA246G0167 Erigeron canadensis HOM05D005160 ORTHO05D006127 2.5e-94 350.5 275 66.9
Pp3c15_6240 Physcomitrium patens HOM05D005160 ORTHO05D006127 1.4e-89 334.7 566 37.5
Lj5A181T55 Lonicera japonica HOM05D005160 ORTHO05D006127 2.7e-88 330.5 380 49.7
CANSAT54G2532 Cannabis sativa HOM05D005160 ORTHO05D006127 5.9e-88 329.3 387 50.4
AL7G44960 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 4.0e-84 316.6 395 50.1
AagrBONN_evm.TU.Sc2ySwM_344.1211 Anthoceros agrestis HOM05D005160 ORTHO05D006127 2.6e-83 313.9 628 34.7
Cpa.g.sc37.161 Carica papaya HOM05D005160 ORTHO05D006127 3.4e-83 313.5 394 47.7
arahy.Tifrunner.gnm1.ann1.JXV2U6 Arachis hypogaea HOM05D005160 ORTHO05D006127 9.8e-83 312.0 393 48.1
arahy.Tifrunner.gnm1.ann1.IE9R9X Arachis hypogaea HOM05D005160 ORTHO05D006127 2.9e-82 310.5 393 47.8
Manes.05G150701 Manihot esculenta HOM05D005160 ORTHO05D006127 1.2e-80 305.1 350 50.6
Mapoly0029s0105 Marchantia polymorpha HOM05D005160 ORTHO05D006127 2.7e-80 303.9 559 37.4
Manes.07G080900 Manihot esculenta HOM05D005160 ORTHO05D006127 1.5e-78 298.1 350 49.7
BraA08t34366Z Brassica rapa HOM05D005160 ORTHO05D006127 3.3e-78 297.0 382 47.4
Lalb_Chr01g0001791 Lupinus albus HOM05D005160 ORTHO05D006127 2.1e-72 277.7 258 60.5
Lj9A392T36 Lonicera japonica HOM05D005160 ORTHO05D006127 1.3e-66 258.5 232 64.7
Lj9A392T37 Lonicera japonica HOM05D005160 ORTHO05D006127 3.8e-58 230.3 167 71.9
Pp3c24_1990 Physcomitrium patens HOM05D005160 ORTHO05D006127 1.1e-44 185.7 408 33.1
SEGI_18476 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 2.4e-44 184.5 187 52.4
Cpa.g.sc37.160 Carica papaya HOM05D005160 ORTHO05D006127 6.0e-40 169.9 177 55.4
MCO01G409 Micromonas commoda HOM05D005160 ORTHO05D006127 5.8e-35 153.3 345 27.8
CBR_g32587 Chara braunii HOM05D005160 ORTHO05D006127 1.0e-34 152.5 337 29.1
Lalb_Chr01g0001781 Lupinus albus HOM05D005160 ORTHO05D006127 1.3e-31 142.1 294 36.4
HPP92_025488 Vanilla planifolia HOM05D005160 ORTHO05D006127 1.8e-31 141.7 114 68.4
Cre09.g390467 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 1.4e-25 122.1 372 28.5
AagrBONN_evm.TU.Sc2ySwM_228.1713 Anthoceros agrestis HOM05D022446 ORTHO05D006127 2.5e-25 121.3 643 24.1
Migut.N03290 Erythranthe guttata HOM05D005160 ORTHO05D006127 7.9e-24 116.3 103 66.0
CDE02G2974 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 2.2e-21 108.2 161 40.4
MCO08G169 Micromonas commoda HOM05D005160 ORTHO05D006127 2.8e-21 107.8 353 26.3
TPR.G40783 Trifolium pratense HOM05D005160 ORTHO05D006127 1.1e-20 105.9 75 70.7
Migut.B00916 Erythranthe guttata HOM05D005160 ORTHO05D006127 3.1e-20 104.4 87 66.7
CDE04G1166 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 3.8e-18 97.4 199 34.7
Cre14.g617800 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 3.0e-15 87.8 262 25.6
VMungo1080G0079 Vigna mungo HOM05D005160 ORTHO05D006127 1.3e-13 82.4 200 37.0
PRCOL_00003313 Prasinoderma coloniale HOM05D005160 ORTHO05D006127 4.8e-13 80.5 562 21.4
Cre06.g278550 Chlamydomonas reinhardtii HOM05D005160 ORTHO05D006127 7.9e-08 63.2 393 22.6
MD08G1139200 Malus domestica HOM05D005160 ORTHO05D006127 7.9e-08 63.2 94 44.7
arahy.Tifrunner.gnm1.ann1.HVU79Z Arachis hypogaea HOM05D005032 ORTHO05D006268 1.0e-07 62.8 226 25.2
arahy.Tifrunner.gnm1.ann1.P6ZXGF Arachis hypogaea HOM05D005032 ORTHO05D006268 2.3e-07 61.6 226 24.8
AagrBONN_evm.TU.Sc2ySwM_228.1711 Anthoceros agrestis HOM05D000883 ORTHO05D002942 5.2e-07 60.5 260 27.7
VMungo1215G1708 Vigna mungo HOM05D005032 ORTHO05D006268 8.8e-07 59.7 226 24.8
Glyma.08G315000 Glycine max HOM05D005160 ORTHO05D006127 1.1e-06 59.3 51 54.9
Phvul.003G028700 Phaseolus vulgaris HOM05D005032 ORTHO05D006268 2.6e-06 58.2 226 23.9
CiPaw.16G004100 Carya illinoinensis HOM05D005032 ORTHO05D006268 3.3e-06 57.8 230 27.4
ECA246G3837 Erigeron canadensis HOM05D005032 ORTHO05D006268 7.4e-06 56.6 226 26.5
Ca_19113_v3 Cicer arietinum L. HOM05D005032 ORTHO05D006268 9.7e-06 56.2 226 25.2


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