Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0579G149 Amborella trichopoda HOM05D007426 ORTHO05D009167 6.0e-122 442.6 221 100.0
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 9.5e-35 152.9 203 43.3
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 3.1e-33 147.9 142 51.4
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 3.4e-32 144.4 227 38.3
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 5.8e-32 143.7 170 42.9
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 2.9e-31 141.4 169 43.2
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 8.3e-31 139.8 140 48.6
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 1.9e-30 138.7 139 48.9
MELO3C012287.2 Cucumis melo HOM05D007426 ORTHO05D009167 1.6e-29 135.6 201 38.8
CsaV3_5G034750 Cucumis sativus L. HOM05D007426 ORTHO05D009167 1.6e-29 135.6 201 39.3
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 2.0e-29 135.2 210 38.1
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 2.0e-29 135.2 167 41.3
Haze_00680 Corylus avellana HOM05D007426 ORTHO05D009167 2.7e-29 134.8 212 37.7
Lalb_Chr10g0096341 Lupinus albus HOM05D007426 ORTHO05D009167 6.0e-29 133.7 139 49.6
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 1.3e-28 132.5 147 45.6
Lj3A877T95 Lonicera japonica HOM05D007426 ORTHO05D009167 1.7e-28 132.1 142 46.5
Manes.06G063200 Manihot esculenta HOM05D007426 ORTHO05D009167 1.7e-28 132.1 142 45.1
Sed0007337 Sechium edule HOM05D007426 ORTHO05D009167 3.0e-28 131.3 173 42.8
Atru.chr11.331 Acer truncatum HOM05D007426 ORTHO05D009167 3.9e-28 131.0 140 44.3
Ciclev10017504m.g Citrus clementina HOM05D007426 ORTHO05D009167 3.9e-28 131.0 138 45.7
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 3.9e-28 131.0 197 36.5
ClCG04G001050 Citrullus lanatus HOM05D007426 ORTHO05D009167 5.0e-28 130.6 139 46.0
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 8.6e-28 129.8 134 47.8
CANSAT01G1275 Cannabis sativa HOM05D007426 ORTHO05D009167 1.9e-27 128.6 175 40.0
Duzib248G0356 Durio zibethinus HOM05D007426 ORTHO05D009167 1.9e-27 128.6 180 39.4
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 7.3e-27 126.7 195 36.9
Gorai.005G194300 Gossypium raimondii HOM05D007426 ORTHO05D009167 1.2e-26 125.9 169 40.2
vmacro10360 Vaccinium macrocarpon HOM05D007426 ORTHO05D009167 1.2e-26 125.9 137 44.5
CiPaw.05G245100 Carya illinoinensis HOM05D007426 ORTHO05D009167 2.1e-26 125.2 179 36.3
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 2.1e-26 125.2 175 39.4
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 2.1e-26 125.2 147 44.2
Hma1.2p1_0882F.1_g232200 Hydrangea macrophylla HOM05D007426 ORTHO05D009167 3.6e-26 124.4 175 41.1
Gohir.D02G172600 Gossypium hirsutum HOM05D007426 ORTHO05D009167 4.7e-26 124.0 169 40.2
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 4.7e-26 124.0 139 43.2
Gohir.A03G149700 Gossypium hirsutum HOM05D007426 ORTHO05D009167 1.1e-25 122.9 169 39.6
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 1.1e-25 122.9 141 43.3
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 1.1e-25 122.9 141 43.3
Nitab4.5_0000350g0090 Nicotiana tabacum HOM05D007426 ORTHO05D009167 1.4e-25 122.5 141 43.3
MSTRG.13563 Avicennia marina HOM05D007426 ORTHO05D009167 1.8e-25 122.1 138 44.2
RcHm_v2.0_Chr4g0434041 Rosa chinensis HOM05D007426 ORTHO05D009167 1.8e-25 122.1 176 41.5
Solyc05g008560.1 Solanum lycopersicum HOM05D007426 ORTHO05D009167 1.8e-25 122.1 141 42.6
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 3.1e-25 121.3 139 43.9
HPP92_023011 Vanilla planifolia HOM05D007426 ORTHO05D009167 3.1e-25 121.3 168 36.9
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 4.0e-25 120.9 141 43.3
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 6.8e-25 120.2 147 42.9
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 8.9e-25 119.8 142 40.8
Lj2g0001206 Lotus japonicus HOM05D007426 ORTHO05D009167 1.5e-24 119.0 137 44.5
Cc11_g09290 Coffea canephora HOM05D007426 ORTHO05D009167 2.0e-24 118.6 129 44.2
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 2.0e-24 118.6 144 41.7
Cpa.g.sc65.89 Carica papaya HOM05D007426 ORTHO05D009167 3.4e-24 117.9 139 39.6
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 3.4e-24 117.9 161 41.0
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 3.4e-24 117.9 140 40.7
THA.LOC104821759 Tarenaya hassleriana HOM05D007426 ORTHO05D009167 3.4e-24 117.9 183 34.4
Lsat_1_v5_gn_4_15701 Lactuca sativa HOM05D007426 ORTHO05D009167 1.3e-23 115.9 142 40.8
Psat6g044600 Pisum sativum HOM05D007426 ORTHO05D009167 2.2e-23 115.2 172 37.8
Aa31LG7G6970 Aethionema arabicum HOM05D007426 ORTHO05D009167 2.9e-23 114.8 139 39.6
SGA_v2.0_scaffold376G50296 Striga asiatica HOM05D007426 ORTHO05D009167 2.9e-23 114.8 140 39.3
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea HOM05D003289 ORTHO05D009167 4.9e-23 114.0 183 38.8
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 4.9e-23 114.0 183 38.8
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 4.9e-23 114.0 144 41.0
Actinidia34749 Actinidia chinensis HOM05D007426 ORTHO05D009167 6.4e-23 113.6 127 45.7
SalBow8G0581 Salvia bowleyana HOM05D007426 ORTHO05D009167 1.9e-22 112.1 140 40.7
CAN.G1489.16 Capsicum annuum HOM05D007426 ORTHO05D009167 4.1e-22 110.9 139 43.9
TWI79G0655 Tripterygium wilfordii HOM05D007426 ORTHO05D009167 5.4e-22 110.5 182 35.2
CARHR023340 Cardamine hirsuta HOM05D007426 ORTHO05D009167 3.0e-20 104.8 142 36.6
Thhalv10006897m.g Eutrema salsugineum HOM05D007426 ORTHO05D009167 3.0e-20 104.8 139 37.4
Carub.0001s2246 Capsella rubella HOM05D007426 ORTHO05D009167 8.6e-20 103.2 142 36.6
FAN12G1804 Fragaria x ananassa HOM05D007426 ORTHO05D009167 8.6e-20 103.2 169 34.9
AL1G36520 Arabidopsis lyrata HOM05D007426 ORTHO05D009167 1.9e-19 102.1 139 36.7
AT1G22960 Arabidopsis thaliana HOM05D007426 ORTHO05D009167 1.9e-19 102.1 142 35.2
FAN12G0928 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.9e-19 102.1 140 38.6
Sp1g20420 Schrenkiella parvula HOM05D007426 ORTHO05D009167 3.3e-19 101.3 184 33.2
ECA234G2171 Erigeron canadensis HOM05D007426 ORTHO05D009167 5.6e-19 100.5 191 32.5
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 2.2e-15 88.6 84 54.8
BcaB07g32294 Brassica carinata HOM05D007426 ORTHO05D009167 2.9e-15 88.2 137 32.1
BraA09t39664Z Brassica rapa HOM05D007426 ORTHO05D009167 2.9e-15 88.2 137 32.1
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 8.4e-15 86.7 140 32.9
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 8.4e-15 86.7 140 32.9
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 1.4e-14 85.9 140 32.9
Migut.E00390 Erythranthe guttata HOM05D007426 ORTHO05D009167 7.1e-14 83.6 144 32.6
A09p41750 Brassica napus HOM05D007426 ORTHO05D009167 3.5e-13 81.3 132 31.1
A01p19900 Brassica napus HOM05D007426 ORTHO05D009167 4.6e-13 80.9 132 31.1
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 7.8e-13 80.1 64 60.9
Cfa015816 Carpinus fangiana HOM05D007426 ORTHO05D009167 3.0e-12 78.2 75 48.0
SEGI_36761 Sequoiadendron giganteum HOM05D007426 ORTHO05D009167 3.0e-12 78.2 166 30.1
Nitab4.5_0005793g0030 Nicotiana tabacum HOM05D007956 ORTHO05D010152 6.6e-12 77.0 196 27.0
Oeu048376.1 Olea europaea HOM05D007426 ORTHO05D009167 8.7e-12 76.6 155 31.6
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 9.6e-11 73.2 133 33.1
Solyc02g080170.1 Solanum lycopersicum HOM05D007956 ORTHO05D010152 8.1e-10 70.1 171 28.7
EL10Ac8g19997 Beta vulgaris HOM05D007956 ORTHO05D010152 3.1e-09 68.2 184 27.7
FAN17G2923 Fragaria x ananassa HOM05D007426 ORTHO05D009167 3.1e-09 68.2 82 43.9
HanXRQChr16g0515891 Helianthus annuus HOM05D007956 ORTHO05D010152 4.0e-09 67.8 134 29.1
Sopen02g024890 Solanum pennellii HOM05D007956 ORTHO05D010152 4.0e-09 67.8 171 28.7
PGSC0003DMG400002071 Solanum tuberosum HOM05D007956 ORTHO05D010152 4.0e-09 67.8 171 28.7
MBI08_g04815_MAGBIO Magnolia biondii HOM05D006287 ORTHO05D008192 5.2e-09 67.4 139 27.3
FvH4_4g26410 Fragaria vesca HOM05D007426 ORTHO05D009167 6.9e-09 67.0 92 39.1
BcaB03g11918 Brassica carinata HOM05D007426 ORTHO05D009167 1.5e-08 65.9 98 41.8
Sabra04G0011500 Salix brachista HOM05D007956 ORTHO05D010152 1.5e-08 65.9 136 29.4
CAN.G569.38 Capsicum annuum HOM05D007956 ORTHO05D010152 2.0e-08 65.5 195 23.6
CiPaw.09G087900 Carya illinoinensis HOM05D007956 ORTHO05D010152 2.0e-08 65.5 130 28.5
Nitab4.5_0002347g0140 Nicotiana tabacum HOM05D007956 ORTHO05D010152 2.0e-08 65.5 185 28.6
ATR1076G001 Amborella trichopoda HOM05D007426 ORTHO05D009167 5.8e-08 63.9 33 97.0
FAN07G1506 Fragaria x ananassa HOM05D007426 ORTHO05D009167 7.6e-08 63.5 59 50.8
SEGI_11241 Sequoiadendron giganteum HOM05D007496 ORTHO05D009479 3.8e-07 61.2 152 29.6
SEGI_14415 Sequoiadendron giganteum HOM05D006931 ORTHO05D009509 3.8e-07 61.2 139 28.1
EL10Ac6g15406 Beta vulgaris HOM05D007496 ORTHO05D009479 8.4e-07 60.1 141 27.0
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 1.9e-06 58.9 127 29.1
Lsat_1_v5_gn_4_59081 Lactuca sativa HOM05D007956 ORTHO05D010152 3.2e-06 58.2 144 25.0
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 4.2e-06 57.8 128 29.7
Zm00001eb406750 Zea mays HOM05D025020 ORTHO05D009167 4.2e-06 57.8 140 31.4
SEGI_23973 Sequoiadendron giganteum HOM05D007063 ORTHO05D008822 5.4e-06 57.4 192 24.5
BcaNung03837 Brassica carinata HOM05D007956 ORTHO05D010152 7.1e-06 57.0 161 28.6


User provided reference genes

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