Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.6e-79 299.3 144 100.0
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 3.0e-54 215.3 116 89.7
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.4e-51 205.7 148 73.0
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.3e-49 199.9 149 70.5
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 1.3e-49 199.9 139 71.9
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 3.9e-49 198.4 146 71.2
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 5.0e-49 198.0 139 69.8
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 6.6e-49 197.6 139 72.7
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 8.6e-49 197.2 137 70.8
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 8.6e-49 197.2 146 68.5
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 1.1e-48 196.8 144 69.4
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.5e-48 196.4 139 69.8
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.5e-48 196.4 139 69.8
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 7.3e-48 194.1 150 69.3
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.2e-47 193.4 147 68.0
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 1.6e-47 193.0 146 67.8
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.8e-47 192.2 137 70.8
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.6e-47 191.8 149 67.8
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 3.6e-47 191.8 140 71.4
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 8.0e-47 190.7 148 68.2
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.1e-46 190.3 145 66.2
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.1e-46 190.3 149 67.1
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.4e-46 189.9 144 66.7
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 1.4e-46 189.9 147 66.7
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.8e-46 189.5 138 68.1
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 1.8e-46 189.5 143 66.4
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.3e-46 189.1 140 67.9
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.3e-46 189.1 144 66.7
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 4.0e-46 188.3 146 68.5
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 4.0e-46 188.3 116 75.0
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 4.0e-46 188.3 146 63.7
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 5.2e-46 188.0 145 65.5
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 5.2e-46 188.0 147 68.0
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 6.8e-46 187.6 145 65.5
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 8.9e-46 187.2 136 68.4
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 8.9e-46 187.2 144 66.0
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 1.2e-45 186.8 144 66.0
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 1.5e-45 186.4 145 65.5
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 2.0e-45 186.0 144 66.0
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 2.0e-45 186.0 145 65.5
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 2.0e-45 186.0 144 66.0
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 2.0e-45 186.0 144 66.0
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 2.0e-45 186.0 145 65.5
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.6e-45 185.7 145 66.9
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 2.6e-45 185.7 148 65.5
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 3.4e-45 185.3 144 66.0
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 4.4e-45 184.9 144 66.0
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 4.4e-45 184.9 144 66.0
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 4.4e-45 184.9 145 65.5
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 4.4e-45 184.9 145 66.2
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 5.8e-45 184.5 143 65.0
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 7.5e-45 184.1 136 67.6
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 7.5e-45 184.1 148 64.9
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 7.5e-45 184.1 137 69.3
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 9.8e-45 183.7 136 70.6
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.3e-44 183.3 149 65.8
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 1.3e-44 183.3 147 65.3
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.7e-44 183.0 141 66.0
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 2.2e-44 182.6 145 64.1
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 4.9e-44 181.4 144 65.3
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 4.9e-44 181.4 144 65.3
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 8.3e-44 180.6 137 66.4
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 8.3e-44 180.6 144 64.6
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 8.3e-44 180.6 144 63.2
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.1e-43 180.3 149 66.4
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 1.1e-43 180.3 174 56.9
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 1.9e-43 179.5 137 66.4
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.9e-43 179.5 144 63.2
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.9e-43 179.5 134 69.4
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 1.9e-43 179.5 144 62.5
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.9e-43 179.5 144 63.2
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 3.2e-43 178.7 145 64.1
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 3.2e-43 178.7 146 63.0
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 4.1e-43 178.3 145 64.1
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 5.4e-43 177.9 143 64.3
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 7.0e-43 177.6 138 65.9
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 7.0e-43 177.6 146 65.1
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 9.2e-43 177.2 144 63.2
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.2e-42 176.8 148 62.2
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 1.6e-42 176.4 137 66.4
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 1.6e-42 176.4 140 65.0
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.6e-42 176.4 147 62.6
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 1.6e-42 176.4 149 63.8
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 4.6e-42 174.9 148 61.5
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 6.0e-42 174.5 145 64.8
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.0e-41 173.7 148 60.8
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.0e-41 173.7 146 63.7
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 1.3e-41 173.3 139 64.7
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.3e-41 173.3 139 64.0
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 1.7e-41 172.9 105 74.3
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 1.7e-41 172.9 144 61.8
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.3e-41 172.6 148 60.8
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 5.0e-41 171.4 148 58.8
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 5.0e-41 171.4 139 63.3
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 6.6e-41 171.0 148 60.1
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 8.6e-41 170.6 145 63.4
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.1e-40 170.2 139 63.3
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.1e-40 170.2 146 61.6
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 1.9e-40 169.5 116 71.6
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.9e-40 169.5 148 60.1
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 3.3e-40 168.7 138 63.0
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 4.3e-40 168.3 140 61.4
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 9.5e-40 167.2 134 67.2
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.6e-39 166.4 115 69.6
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 1.6e-39 166.4 121 68.6
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 3.6e-39 165.2 141 59.6
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 4.7e-39 164.9 120 67.5
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 1.4e-38 163.3 137 64.2
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 3.1e-38 162.2 84 84.5
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 6.8e-38 161.0 104 72.1
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.0e-37 159.5 84 82.1
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 7.5e-37 157.5 86 83.7
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 4.9e-36 154.8 117 67.5
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 1.4e-35 153.3 103 69.9
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 1.9e-35 152.9 110 69.1
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 1.9e-35 152.9 136 61.0
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 8.9e-30 134.0 113 63.7
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 9.9e-29 130.6 108 63.0
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 8.4e-28 127.5 113 61.9
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 2.7e-26 122.5 122 61.5
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 2.7e-26 122.5 122 59.0
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 1.0e-25 120.6 104 58.7
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 9.6e-24 114.0 68 79.4
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 8.1e-23 110.9 114 57.9
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 4.4e-21 105.1 88 62.5
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 4.2e-19 98.6 100 47.0
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.9e-16 89.7 144 43.1
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 4.8e-15 85.1 139 41.0
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.3e-12 77.0 90 50.0
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 5.6e-08 61.6 31 80.6
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 5.3e-06 55.1 63 52.4
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 9.0e-06 54.3 74 45.9


User provided reference genes

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