Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 9.0e-155 550.4 324 100.0
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 2.0e-106 389.8 240 80.0
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.0e-105 387.5 240 79.2
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.5e-104 382.9 240 78.8
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 7.2e-104 381.3 234 79.1
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.1e-103 379.8 242 78.5
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.1e-103 379.8 242 76.9
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 2.7e-103 379.4 240 77.9
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 2.7e-103 379.4 242 78.1
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 6.1e-103 378.3 242 78.1
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 6.1e-103 378.3 241 78.4
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 8.0e-103 377.9 324 62.7
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.0e-102 377.5 234 78.2
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.0e-102 377.5 242 76.9
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 1.8e-102 376.7 240 77.9
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.3e-102 376.3 242 77.7
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 3.0e-102 375.9 240 77.5
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 3.0e-102 375.9 240 78.3
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 4.0e-102 375.6 241 76.8
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 4.0e-102 375.6 238 77.3
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 5.2e-102 375.2 242 76.4
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 5.2e-102 375.2 243 76.5
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 8.8e-102 374.4 242 76.4
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.2e-101 374.0 240 77.5
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.2e-101 374.0 240 77.1
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.2e-101 374.0 240 77.1
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.2e-101 374.0 242 76.0
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.2e-101 374.0 242 76.0
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.0e-101 373.2 242 76.4
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 2.0e-101 373.2 241 77.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 2.0e-101 373.2 241 77.6
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.0e-101 373.2 242 76.0
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 3.4e-101 372.5 229 77.7
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 3.4e-101 372.5 229 77.7
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 3.4e-101 372.5 242 76.0
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 5.7e-101 371.7 239 77.4
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 7.5e-101 371.3 242 75.6
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.5e-101 371.3 239 77.8
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 7.5e-101 371.3 241 76.8
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 7.5e-101 371.3 241 76.3
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 7.5e-101 371.3 239 78.2
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 7.5e-101 371.3 242 76.4
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 7.5e-101 371.3 241 78.0
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 9.8e-101 370.9 242 76.4
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.7e-100 370.2 239 77.8
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.8e-100 369.4 242 75.2
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 2.8e-100 369.4 232 79.3
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 3.7e-100 369.0 239 77.4
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.7e-100 369.0 239 77.4
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 4.8e-100 368.6 235 75.3
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 4.8e-100 368.6 236 76.3
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 4.8e-100 368.6 243 74.5
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 4.8e-100 368.6 241 75.9
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 6.3e-100 368.2 235 74.9
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 8.3e-100 367.9 236 76.3
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.1e-99 367.5 235 75.3
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.1e-99 367.5 235 75.3
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 1.1e-99 367.5 235 75.3
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.4e-99 367.1 235 75.3
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 1.4e-99 367.1 235 75.3
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 1.4e-99 367.1 242 76.0
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.8e-99 366.7 235 74.9
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.8e-99 366.7 243 73.7
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.8e-99 366.7 235 74.5
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 2.4e-99 366.3 242 75.6
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 3.1e-99 365.9 235 74.9
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 3.1e-99 365.9 235 74.9
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 3.1e-99 365.9 237 73.8
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 4.1e-99 365.5 236 75.0
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 9.1e-99 364.4 242 73.6
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 9.1e-99 364.4 242 73.6
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 2.0e-98 363.2 242 73.1
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 2.7e-98 362.8 235 74.9
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 4.5e-98 362.1 234 76.9
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 4.5e-98 362.1 235 74.9
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 5.9e-98 361.7 235 73.6
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 7.7e-98 361.3 235 74.0
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 2.3e-97 359.8 242 73.6
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 2.3e-97 359.8 235 74.5
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 2.9e-97 359.4 235 74.5
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.9e-97 359.4 231 76.6
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 3.8e-97 359.0 242 72.3
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 5.0e-97 358.6 242 72.7
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 5.0e-97 358.6 243 72.8
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.1e-96 357.5 243 72.4
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.5e-96 357.1 223 76.7
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.9e-96 356.7 235 72.8
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 2.5e-96 356.3 235 73.2
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 3.6e-95 352.4 228 75.9
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 8.0e-95 351.3 261 68.6
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 3.0e-94 349.4 229 76.4
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 8.9e-94 347.8 235 72.3
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 2.6e-93 346.3 219 78.1
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 9.8e-93 344.4 222 77.0
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 4.5e-90 335.5 232 72.4
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.3e-89 333.2 218 76.6
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 3.6e-87 325.9 243 67.1
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.0e-86 324.3 244 67.6
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 2.6e-85 319.7 243 66.3
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 3.4e-85 319.3 245 64.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 5.8e-85 318.5 242 69.0
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 1.7e-84 317.0 207 74.4
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 9.2e-83 311.2 235 66.8
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 1.9e-80 303.5 234 65.8
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 3.3e-80 302.8 240 63.8
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.4e-78 297.4 239 60.3
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.4e-75 287.3 224 63.8
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 3.5e-66 256.1 236 55.5
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 9.6e-56 221.5 226 52.7
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 4.9e-52 209.1 231 51.5
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 3.9e-49 199.5 145 71.7
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 1.3e-47 194.5 223 49.8
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 3.3e-40 169.9 112 72.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 6.2e-39 165.6 104 76.9
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.4e-38 164.5 107 71.0
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 1.5e-16 91.3 56 75.0
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.7e-10 70.5 42 69.0
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.6e-08 63.9 37 75.7
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.3e-07 61.6 64 54.7


User provided reference genes

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