Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0579G061 Amborella trichopoda HOM05D003381 ORTHO05D003880 2.1e-47 192.2 108 100.0
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 5.5e-16 87.8 100 55.0
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 7.2e-16 87.4 97 51.5
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 1.2e-15 86.7 100 52.0
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 2.1e-15 85.9 92 54.3
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 2.1e-15 85.9 97 53.6
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 2.1e-15 85.9 97 50.5
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 3.6e-15 85.1 96 56.2
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 6.1e-15 84.3 84 58.3
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 6.1e-15 84.3 94 55.3
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 8.0e-15 84.0 102 52.9
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 8.0e-15 84.0 101 52.5
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 8.0e-15 84.0 92 53.3
SGA_v2.0_scaffold44G16873 Striga asiatica HOM05D003381 ORTHO05D003880 8.0e-15 84.0 104 49.0
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 1.0e-14 83.6 83 57.8
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 1.0e-14 83.6 83 57.8
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 1.4e-14 83.2 83 56.6
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.8e-14 82.8 92 52.2
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.8e-14 82.8 92 52.2
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 2.3e-14 82.4 79 55.7
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 2.3e-14 82.4 82 57.3
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 3.9e-14 81.6 85 57.6
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 3.9e-14 81.6 85 57.6
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 3.9e-14 81.6 92 51.1
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 3.9e-14 81.6 108 50.0
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 6.7e-14 80.9 89 53.9
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 6.7e-14 80.9 85 54.1
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 8.8e-14 80.5 89 55.1
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 1.1e-13 80.1 84 53.6
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 1.5e-13 79.7 92 53.3
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 2.0e-13 79.3 82 54.9
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.0e-13 79.3 84 53.6
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 2.6e-13 79.0 92 51.1
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 3.3e-13 78.6 84 52.4
Eucgr.K00481 Eucalyptus grandis HOM05D003381 ORTHO05D003880 4.4e-13 78.2 97 52.6
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 4.4e-13 78.2 87 55.2
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 5.7e-13 77.8 94 53.2
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 7.4e-13 77.4 90 53.3
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 7.4e-13 77.4 85 55.3
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 9.7e-13 77.0 81 56.8
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 1.3e-12 76.6 85 52.9
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 1.7e-12 76.3 82 53.7
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 2.2e-12 75.9 88 52.3
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 2.2e-12 75.9 85 54.1
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 2.8e-12 75.5 82 54.9
PSO017G3293 Papaver somniferum HOM05D003381 ORTHO05D003880 2.8e-12 75.5 84 50.0
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 3.7e-12 75.1 87 55.2
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 3.7e-12 75.1 83 54.2
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 4.8e-12 74.7 84 52.4
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 4.8e-12 74.7 85 50.6
SGA_v2.0_scaffold351G49675 Striga asiatica HOM05D003381 ORTHO05D003880 8.2e-12 73.9 84 51.2
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 1.1e-11 73.6 91 48.4
CANSAT21G0934 Cannabis sativa HOM05D003381 ORTHO05D003880 1.4e-11 73.2 92 48.9
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.4e-11 73.2 95 48.4
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.8e-11 72.8 93 49.5
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 2.4e-11 72.4 93 50.5
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 3.1e-11 72.0 80 52.5
Sc14g0006700 Simmondsia chinensis HOM05D003381 ORTHO05D003880 4.1e-11 71.6 79 50.6
Zm00001eb220550 Zea mays HOM05D003381 ORTHO05D003880 4.1e-11 71.6 90 44.4
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 7.0e-11 70.9 115 43.5
MBI04_g09823_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 7.0e-11 70.9 84 53.6
Psat5g070560 Pisum sativum HOM05D003381 ORTHO05D003880 7.0e-11 70.9 92 48.9
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 7.0e-11 70.9 84 51.2
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 7.0e-11 70.9 83 53.0
Lalb_Chr10g0102971 Lupinus albus HOM05D003381 ORTHO05D003880 9.1e-11 70.5 83 51.8
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 9.1e-11 70.5 84 52.4
HPP92_008910 Vanilla planifolia HOM05D003381 ORTHO05D003880 9.1e-11 70.5 79 49.4
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 1.2e-10 70.1 79 55.7
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 1.6e-10 69.7 103 44.7
Migut.F00119 Erythranthe guttata HOM05D003381 ORTHO05D003880 2.0e-10 69.3 76 48.7
Zm00001eb043810 Zea mays HOM05D003381 ORTHO05D003880 2.0e-10 69.3 93 44.1
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 2.6e-10 68.9 92 46.7
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 2.6e-10 68.9 84 52.4
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 3.5e-10 68.6 86 50.0
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 3.5e-10 68.6 90 47.8
Ah.13g071070 Amaranthus hybridus HOM05D003381 ORTHO05D003880 4.5e-10 68.2 85 42.4
AUR62005945 Chenopodium quinoa HOM05D003381 ORTHO05D003880 4.5e-10 68.2 84 47.6
Nn3g18090 Nelumbo nucifera HOM05D003381 ORTHO05D003880 5.9e-10 67.8 89 51.7
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 5.9e-10 67.8 90 47.8
EL10Ac3g05128 Beta vulgaris HOM05D003381 ORTHO05D003880 7.7e-10 67.4 84 48.8
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 7.7e-10 67.4 92 47.8
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 7.7e-10 67.4 107 44.9
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 7.7e-10 67.4 85 50.6
CDE04G0378 Ceratophyllum demersum HOM05D003381 ORTHO05D003880 1.0e-09 67.0 71 57.7
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 1.0e-09 67.0 84 50.0
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 1.0e-09 67.0 84 51.2
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 1.3e-09 66.6 74 52.7
HanXRQChr16g0499781 Helianthus annuus HOM05D003381 ORTHO05D003880 1.3e-09 66.6 82 43.9
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 1.3e-09 66.6 109 42.2
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 1.3e-09 66.6 77 51.9
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.7e-09 66.2 79 48.1
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 1.7e-09 66.2 91 45.1
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 2.2e-09 65.9 82 48.8
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 2.9e-09 65.5 105 45.7
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 3.8e-09 65.1 84 46.4
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 3.8e-09 65.1 84 46.4
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 5.0e-09 64.7 84 50.0
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 6.5e-09 64.3 84 48.8
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 6.5e-09 64.3 89 47.2
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 8.5e-09 63.9 87 46.0
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.1e-08 63.5 113 41.6
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 1.5e-08 63.2 80 50.0
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 1.9e-08 62.8 88 47.7
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.9e-08 62.8 84 51.2
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.5e-08 62.4 96 44.8
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 2.5e-08 62.4 108 43.5
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 3.2e-08 62.0 99 44.4
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 4.2e-08 61.6 89 46.1
Oeu055427.1 Olea europaea HOM05D003381 ORTHO05D003880 4.2e-08 61.6 68 51.5
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 5.5e-08 61.2 96 44.8
SalBow4G1643 Salvia bowleyana HOM05D003381 ORTHO05D003880 5.5e-08 61.2 77 50.6
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 7.2e-08 60.8 101 42.6
Eucgr.K00482 Eucalyptus grandis HOM05D003381 ORTHO05D003880 9.4e-08 60.5 97 46.4
Eucgr.K00530 Eucalyptus grandis HOM05D003381 ORTHO05D003880 9.4e-08 60.5 97 46.4
vmacro06476 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 9.4e-08 60.5 87 44.8
PGR142G3642 Punica granatum HOM05D003381 ORTHO05D003880 1.2e-07 60.1 85 45.9
CAN.G65.142 Capsicum annuum HOM05D003381 ORTHO05D003880 1.6e-07 59.7 59 55.9
SEGI_09109 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 1.6e-07 59.7 94 43.6
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 2.7e-07 58.9 85 45.9
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.7e-07 58.9 96 43.8
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.7e-07 58.9 96 42.7
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 2.7e-07 58.9 96 43.8
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 2.7e-07 58.9 92 44.6
ECA232G1694 Erigeron canadensis HOM05D003381 ORTHO05D003880 3.6e-07 58.5 66 47.0
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 3.6e-07 58.5 59 52.5
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 8.0e-07 57.4 96 41.7
SEGI_32370 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 1.0e-06 57.0 101 40.6
COL.COLO4_14402 Corchorus olitorius HOM05D003381 ORTHO05D003880 1.8e-06 56.2 54 53.7
SEGI_37007 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 1.8e-06 56.2 93 39.8
THA.LOC104798994 Tarenaya hassleriana HOM05D003381 ORTHO05D003880 3.0e-06 55.5 81 44.4
COL.COLO4_14401 Corchorus olitorius HOM05D003381 ORTHO05D003880 5.2e-06 54.7 79 44.3
Haze_00337 Corylus avellana HOM05D003381 ORTHO05D003880 6.7e-06 54.3 75 45.3


User provided reference genes

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