Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 7.8e-82 307.0 146 100.0
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 1.8e-17 93.2 107 47.7
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 2.3e-17 92.8 105 45.7
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-15 85.5 103 45.6
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-15 85.5 103 45.6
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-15 85.5 103 45.6
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-15 85.5 103 45.6
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 3.7e-15 85.5 103 45.6
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.4e-14 83.6 62 58.1
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.4e-14 83.6 103 45.6
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 5.3e-14 81.6 82 50.0
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 7.0e-14 81.3 142 35.9
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 9.1e-14 80.9 53 64.2
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.5e-13 79.0 103 41.7
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 7.7e-13 77.8 104 40.4
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 7.7e-13 77.8 104 42.3
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 7.7e-13 77.8 104 42.3
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 7.7e-13 77.8 104 42.3
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 7.7e-13 77.8 104 42.3
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 1.7e-12 76.6 103 41.7
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 3.8e-12 75.5 57 57.9
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 5.0e-12 75.1 107 40.2
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.0e-12 75.1 53 60.4
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 5.0e-12 75.1 58 58.6
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 6.5e-12 74.7 104 43.3
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 1.1e-11 73.9 54 55.6
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.5e-11 73.6 54 55.6
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 4.2e-11 72.0 55 54.5
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 5.5e-11 71.6 49 65.3
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 5.5e-11 71.6 49 65.3
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 5.5e-11 71.6 49 65.3
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 5.5e-11 71.6 49 65.3
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 5.5e-11 71.6 49 65.3
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 7.2e-11 71.2 63 49.2
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 7.2e-11 71.2 63 49.2
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 7.2e-11 71.2 58 51.7
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 7.2e-11 71.2 53 58.5
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 9.4e-11 70.9 53 56.6
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.2e-10 70.5 56 58.9
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.2e-10 70.5 56 58.9
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 1.2e-10 70.5 63 49.2
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 2.1e-10 69.7 52 57.7
SGA_v2.0_scaffold420G51422 Striga asiatica HOM05D002660 ORTHO05D019448 6.1e-10 68.2 53 54.7
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 8.0e-10 67.8 53 56.6
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 8.0e-10 67.8 53 56.6
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 2.3e-09 66.2 53 52.8
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 6.7e-09 64.7 47 57.4
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 6.7e-09 64.7 38 71.1
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 8.8e-09 64.3 51 51.0
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 2.0e-08 63.2 48 60.4
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 2.0e-08 63.2 58 48.3
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 2.2e-07 59.7 40 57.5
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 2.2e-07 59.7 40 57.5
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 2.2e-07 59.7 40 57.5
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 1.8e-06 56.6 82 43.9
Dinv06671 Davidia involucrata HOM05D011380 ORTHO05D019448 2.4e-06 56.2 40 57.5
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 4.1e-06 55.5 42 52.4


User provided reference genes

Program Settings